==43489== Memcheck, a memory error detector ==43489== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43489== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43489== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacSimulation -malloc_debug -malloc_dump -memory_info ==43489== Parent PID: 23965 ==43489== ==43489== ==43489== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43489== Open file descriptor 12: ==43489== at 0x893807D: pipe (pipe.c:29) ==43489== by 0x1434307D: ??? ==43489== by 0xEE8A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43489== by 0xA033418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43489== by 0x9FCCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43489== by 0x8CC3D38: PetscInitialize (pinit.c:924) ==43489== by 0x821EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43489== by 0x821EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43489== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43489== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43489== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43489== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43489== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43489== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43489== ==43489== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43489== at 0x893CA1C: __open_nocancel (open64_nocancel.c:39) ==43489== by 0x88C0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43489== by 0x825C822: ??? ==43489== by 0x825C96F: ??? ==43489== by 0xEF2F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43489== by 0xEF2F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43489== by 0xEEE5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43489== by 0xEE8A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43489== by 0xA033418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43489== by 0x9FCCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43489== by 0x8CC3D38: PetscInitialize (pinit.c:924) ==43489== by 0x821EE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43489== by 0x821EEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43489== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43489== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43489== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43489== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43489== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43489== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43489== ==43489== Open file descriptor 145: ==43489== ==43489== ==43489== Open file descriptor 142: ==43489== ==43489== ==43489== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacSimulation_valgrind.txt ==43489== ==43489== ==43489== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43489== ==43489== ==43489== ==43489== HEAP SUMMARY: ==43489== in use at exit: 625,966 bytes in 8,261 blocks ==43489== total heap usage: 4,756,899 allocs, 4,748,638 frees, 2,828,959,837 bytes allocated ==43489== ==43489== LEAK SUMMARY: ==43489== definitely lost: 0 bytes in 0 blocks ==43489== indirectly lost: 0 bytes in 0 blocks ==43489== possibly lost: 0 bytes in 0 blocks ==43489== still reachable: 7,156 bytes in 18 blocks ==43489== suppressed: 618,810 bytes in 8,243 blocks ==43489== Reachable blocks (those to which a pointer was found) are not shown. ==43489== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43489== ==43489== For lists of detected and suppressed errors, rerun with: -s ==43489== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 231 from 34)