==23969== Memcheck, a memory error detector ==23969== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==23969== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==23969== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==23969== Parent PID: 23965 ==23969== ==23969== ==23969== FILE DESCRIPTORS: 9 open (3 std) at exit. ==23969== Open file descriptor 12: ==23969== at 0x4CC307D: pipe (pipe.c:29) ==23969== by 0xAEB707D: ??? ==23969== by 0x89CD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==23969== by 0x623E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==23969== by 0x61D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==23969== by 0x4ECED38: PetscInitialize (pinit.c:924) ==23969== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==23969== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==23969== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==23969== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==23969== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==23969== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==23969== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==23969== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==23969== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==23969== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==23969== by 0x110C15: main (TestCitations.cpp:18) ==23969== ==23969== Open file descriptor 8: /dev/shm/open_mpi.0000 ==23969== at 0x4CC7A1C: __open_nocancel (open64_nocancel.c:39) ==23969== by 0x4C4BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==23969== by 0x4946822: ??? ==23969== by 0x494696F: ??? ==23969== by 0x8A726DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==23969== by 0x8A72938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==23969== by 0x8A28922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==23969== by 0x89CD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==23969== by 0x623E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==23969== by 0x61D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==23969== by 0x4ECED38: PetscInitialize (pinit.c:924) ==23969== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==23969== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==23969== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==23969== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==23969== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==23969== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==23969== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==23969== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==23969== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==23969== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==23969== by 0x110C15: main (TestCitations.cpp:18) ==23969== ==23969== Open file descriptor 145: ==23969== ==23969== ==23969== Open file descriptor 142: ==23969== ==23969== ==23969== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==23969== ==23969== ==23969== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==23969== ==23969== ==23969== ==23969== HEAP SUMMARY: ==23969== in use at exit: 617,951 bytes in 8,239 blocks ==23969== total heap usage: 45,217 allocs, 36,978 frees, 1,338,666,956 bytes allocated ==23969== ==23969== LEAK SUMMARY: ==23969== definitely lost: 0 bytes in 0 blocks ==23969== indirectly lost: 0 bytes in 0 blocks ==23969== possibly lost: 0 bytes in 0 blocks ==23969== still reachable: 24 bytes in 2 blocks ==23969== suppressed: 617,927 bytes in 8,237 blocks ==23969== Reachable blocks (those to which a pointer was found) are not shown. ==23969== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==23969== ==23969== For lists of detected and suppressed errors, rerun with: -s ==23969== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)