==25599== Memcheck, a memory error detector ==25599== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25599== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25599== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25599== Parent PID: 23965 ==25599== ==25599== ==25599== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25599== Open file descriptor 12: ==25599== at 0x110C907D: pipe (pipe.c:29) ==25599== by 0x1972A07D: ??? ==25599== by 0x14C8F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25599== by 0x109D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25599== by 0x1096AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25599== by 0xF63ED38: PetscInitialize (pinit.c:924) ==25599== by 0xF512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25599== by 0xF512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25599== by 0x129501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25599== by 0x1249F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25599== by 0x126F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25599== by 0x126E65: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25599== by 0x127479: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25599== by 0x1231F5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==25599== ==25599== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25599== at 0x110CDA1C: __open_nocancel (open64_nocancel.c:39) ==25599== by 0x11051BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25599== by 0x108CE822: ??? ==25599== by 0x108CE96F: ??? ==25599== by 0x14D346DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25599== by 0x14D34938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25599== by 0x14CEA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25599== by 0x14C8F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25599== by 0x109D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25599== by 0x1096AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25599== by 0xF63ED38: PetscInitialize (pinit.c:924) ==25599== by 0xF512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25599== by 0xF512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25599== by 0x129501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25599== by 0x1249F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25599== by 0x126F6A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25599== by 0x126E65: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25599== by 0x127479: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25599== by 0x1231F5: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==25599== ==25599== Open file descriptor 145: ==25599== ==25599== ==25599== Open file descriptor 142: ==25599== ==25599== ==25599== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithParabolicBoxDomainPdeModifier_valgrind.txt ==25599== ==25599== ==25599== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25599== ==25599== ==25599== ==25599== HEAP SUMMARY: ==25599== in use at exit: 618,370 bytes in 8,236 blocks ==25599== total heap usage: 4,549,506 allocs, 4,541,270 frees, 1,834,398,020 bytes allocated ==25599== ==25599== LEAK SUMMARY: ==25599== definitely lost: 0 bytes in 0 blocks ==25599== indirectly lost: 0 bytes in 0 blocks ==25599== possibly lost: 0 bytes in 0 blocks ==25599== still reachable: 56 bytes in 3 blocks ==25599== suppressed: 618,314 bytes in 8,233 blocks ==25599== Reachable blocks (those to which a pointer was found) are not shown. ==25599== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25599== ==25599== For lists of detected and suppressed errors, rerun with: -s ==25599== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)