==41006== Memcheck, a memory error detector ==41006== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41006== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41006== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithBathProblem -malloc_debug -malloc_dump -memory_info ==41006== Parent PID: 23956 ==41006== ==41006== ==41006== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41006== Open file descriptor 12: ==41006== at 0xAC8007D: pipe (pipe.c:29) ==41006== by 0x1434207D: ??? ==41006== by 0xFB574CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41006== by 0xC37B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41006== by 0xC314D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41006== by 0xB00BD38: PetscInitialize (pinit.c:924) ==41006== by 0xA47DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41006== by 0xA47DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41006== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41006== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41006== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41006== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41006== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41006== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==41006== ==41006== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41006== at 0xAC84A1C: __open_nocancel (open64_nocancel.c:39) ==41006== by 0xAC08BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41006== by 0xA4BB822: ??? ==41006== by 0xA4BB96F: ??? ==41006== by 0xFBFC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41006== by 0xFBFC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41006== by 0xFBB2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41006== by 0xFB572DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41006== by 0xC37B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41006== by 0xC314D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41006== by 0xB00BD38: PetscInitialize (pinit.c:924) ==41006== by 0xA47DE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41006== by 0xA47DEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41006== by 0x14218A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41006== by 0x13BB8D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41006== by 0x13F14C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41006== by 0x13EFEC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41006== by 0x13F683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41006== by 0x139E15: main (TestBidomainWithBathProblem.cpp:19) ==41006== ==41006== Open file descriptor 145: ==41006== ==41006== ==41006== Open file descriptor 142: ==41006== ==41006== ==41006== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithBathProblem_valgrind.txt ==41006== ==41006== ==41006== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41006== ==41006== ==41006== ==41006== HEAP SUMMARY: ==41006== in use at exit: 618,834 bytes in 8,245 blocks ==41006== total heap usage: 1,394,281 allocs, 1,386,036 frees, 1,987,909,225 bytes allocated ==41006== ==41006== LEAK SUMMARY: ==41006== definitely lost: 0 bytes in 0 blocks ==41006== indirectly lost: 0 bytes in 0 blocks ==41006== possibly lost: 0 bytes in 0 blocks ==41006== still reachable: 24 bytes in 2 blocks ==41006== suppressed: 618,810 bytes in 8,243 blocks ==41006== Reachable blocks (those to which a pointer was found) are not shown. ==41006== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41006== ==41006== For lists of detected and suppressed errors, rerun with: -s ==41006== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 66 from 31)