==41007== Memcheck, a memory error detector ==41007== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41007== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41007== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithSvi -malloc_debug -malloc_dump -memory_info ==41007== Parent PID: 23956 ==41007== ==41007== ==41007== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41007== Open file descriptor 12: ==41007== at 0xA7FC07D: pipe (pipe.c:29) ==41007== by 0x1434307D: ??? ==41007== by 0xFB4B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41007== by 0xBEF5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41007== by 0xBE8ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41007== by 0xAB85D38: PetscInitialize (pinit.c:924) ==41007== by 0xA0E0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41007== by 0xA0E0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41007== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41007== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41007== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41007== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41007== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41007== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==41007== ==41007== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41007== at 0xA800A1C: __open_nocancel (open64_nocancel.c:39) ==41007== by 0xA784BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41007== by 0xA11E822: ??? ==41007== by 0xA11E96F: ??? ==41007== by 0xFBF06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41007== by 0xFBF0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41007== by 0xFBA6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41007== by 0xFB4B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41007== by 0xBEF5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41007== by 0xBE8ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41007== by 0xAB85D38: PetscInitialize (pinit.c:924) ==41007== by 0xA0E0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41007== by 0xA0E0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41007== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41007== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41007== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41007== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41007== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41007== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==41007== ==41007== Open file descriptor 145: ==41007== ==41007== ==41007== Open file descriptor 142: ==41007== ==41007== ==41007== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithSvi_valgrind.txt ==41007== ==41007== ==41007== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41007== ==41007== ==41007== ==41007== HEAP SUMMARY: ==41007== in use at exit: 618,834 bytes in 8,245 blocks ==41007== total heap usage: 3,540,035 allocs, 3,531,790 frees, 2,046,990,907 bytes allocated ==41007== ==41007== LEAK SUMMARY: ==41007== definitely lost: 0 bytes in 0 blocks ==41007== indirectly lost: 0 bytes in 0 blocks ==41007== possibly lost: 0 bytes in 0 blocks ==41007== still reachable: 24 bytes in 2 blocks ==41007== suppressed: 618,810 bytes in 8,243 blocks ==41007== Reachable blocks (those to which a pointer was found) are not shown. ==41007== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41007== ==41007== For lists of detected and suppressed errors, rerun with: -s ==41007== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 72 from 34)