==25841== Memcheck, a memory error detector ==25841== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25841== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25841== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==25841== Parent PID: 23956 ==25841== ==25841== ==25841== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25841== Open file descriptor 12: ==25841== at 0xF8B707D: pipe (pipe.c:29) ==25841== by 0x1972907D: ??? ==25841== by 0x14D324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25841== by 0x11515418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25841== by 0x114AED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25841== by 0x101A3D38: PetscInitialize (pinit.c:924) ==25841== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25841== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25841== by 0x1655AC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25841== by 0x15DC09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25841== by 0x160DD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25841== by 0x160C78: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25841== by 0x16130F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25841== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==25841== ==25841== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25841== at 0xF8BBA1C: __open_nocancel (open64_nocancel.c:39) ==25841== by 0xF83FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25841== by 0xF1B3822: ??? ==25841== by 0xF1B396F: ??? ==25841== by 0x14DD76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25841== by 0x14DD7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25841== by 0x14D8D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25841== by 0x14D322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25841== by 0x11515418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25841== by 0x114AED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25841== by 0x101A3D38: PetscInitialize (pinit.c:924) ==25841== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25841== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25841== by 0x1655AC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25841== by 0x15DC09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25841== by 0x160DD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25841== by 0x160C78: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25841== by 0x16130F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25841== by 0x15C025: main (TestCaBasedCellPopulation.cpp:19) ==25841== ==25841== Open file descriptor 145: ==25841== ==25841== ==25841== Open file descriptor 142: ==25841== ==25841== ==25841== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaBasedCellPopulation_valgrind.txt ==25841== ==25841== ==25841== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25841== ==25841== ==25841== ==25841== HEAP SUMMARY: ==25841== in use at exit: 618,447 bytes in 8,240 blocks ==25841== total heap usage: 75,842 allocs, 67,602 frees, 1,347,716,008 bytes allocated ==25841== ==25841== LEAK SUMMARY: ==25841== definitely lost: 0 bytes in 0 blocks ==25841== indirectly lost: 0 bytes in 0 blocks ==25841== possibly lost: 0 bytes in 0 blocks ==25841== still reachable: 56 bytes in 3 blocks ==25841== suppressed: 618,391 bytes in 8,237 blocks ==25841== Reachable blocks (those to which a pointer was found) are not shown. ==25841== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25841== ==25841== For lists of detected and suppressed errors, rerun with: -s ==25841== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)