==43604== Memcheck, a memory error detector ==43604== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43604== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43604== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHeartGeometryInformation -malloc_debug -malloc_dump -memory_info ==43604== Parent PID: 23956 ==43604== ==43604== ==43604== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43604== Open file descriptor 12: ==43604== at 0xA52907D: pipe (pipe.c:29) ==43604== by 0x1434307D: ??? ==43604== by 0xFB4B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43604== by 0xBC24418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43604== by 0xBBBDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43604== by 0xA8B4D38: PetscInitialize (pinit.c:924) ==43604== by 0x9E0FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43604== by 0x9E0FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43604== by 0x11C60C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43604== by 0x117A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43604== by 0x11A4EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43604== by 0x11A38E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43604== by 0x11AA25: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43604== by 0x115E75: main (TestHeartGeometryInformation.cpp:19) ==43604== ==43604== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43604== at 0xA52DA1C: __open_nocancel (open64_nocancel.c:39) ==43604== by 0xA4B1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43604== by 0x9E4D822: ??? ==43604== by 0x9E4D96F: ??? ==43604== by 0xFBF06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43604== by 0xFBF0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43604== by 0xFBA6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43604== by 0xFB4B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43604== by 0xBC24418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43604== by 0xBBBDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43604== by 0xA8B4D38: PetscInitialize (pinit.c:924) ==43604== by 0x9E0FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43604== by 0x9E0FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43604== by 0x11C60C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43604== by 0x117A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43604== by 0x11A4EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43604== by 0x11A38E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43604== by 0x11AA25: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43604== by 0x115E75: main (TestHeartGeometryInformation.cpp:19) ==43604== ==43604== Open file descriptor 145: ==43604== ==43604== ==43604== Open file descriptor 142: ==43604== ==43604== ==43604== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHeartGeometryInformation_valgrind.txt ==43604== ==43604== ==43604== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43604== ==43604== ==43604== ==43604== HEAP SUMMARY: ==43604== in use at exit: 618,354 bytes in 8,235 blocks ==43604== total heap usage: 2,705,974 allocs, 2,697,739 frees, 1,654,097,583 bytes allocated ==43604== ==43604== LEAK SUMMARY: ==43604== definitely lost: 0 bytes in 0 blocks ==43604== indirectly lost: 0 bytes in 0 blocks ==43604== possibly lost: 0 bytes in 0 blocks ==43604== still reachable: 24 bytes in 2 blocks ==43604== suppressed: 618,330 bytes in 8,233 blocks ==43604== Reachable blocks (those to which a pointer was found) are not shown. ==43604== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43604== ==43604== For lists of detected and suppressed errors, rerun with: -s ==43604== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)