==25675== Memcheck, a memory error detector ==25675== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25675== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25675== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsElement -malloc_debug -malloc_dump -memory_info ==25675== Parent PID: 23956 ==25675== ==25675== ==25675== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25675== Open file descriptor 12: ==25675== at 0xF53007D: pipe (pipe.c:29) ==25675== by 0x1972907D: ??? ==25675== by 0x14CE54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25675== by 0x1118C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25675== by 0x11125D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25675== by 0xFE1CD38: PetscInitialize (pinit.c:924) ==25675== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25675== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25675== by 0x11A5B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25675== by 0x115A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25675== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25675== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25675== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25675== by 0x113E95: main (TestPottsElement.cpp:19) ==25675== ==25675== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25675== at 0xF534A1C: __open_nocancel (open64_nocancel.c:39) ==25675== by 0xF4B8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25675== by 0xF1B3822: ??? ==25675== by 0xF1B396F: ??? ==25675== by 0x14D8A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25675== by 0x14D8A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25675== by 0x14D40922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25675== by 0x14CE52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25675== by 0x1118C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25675== by 0x11125D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25675== by 0xFE1CD38: PetscInitialize (pinit.c:924) ==25675== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25675== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25675== by 0x11A5B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25675== by 0x115A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25675== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25675== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25675== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25675== by 0x113E95: main (TestPottsElement.cpp:19) ==25675== ==25675== Open file descriptor 145: ==25675== ==25675== ==25675== Open file descriptor 142: ==25675== ==25675== ==25675== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsElement_valgrind.txt ==25675== ==25675== ==25675== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25675== ==25675== ==25675== ==25675== HEAP SUMMARY: ==25675== in use at exit: 618,415 bytes in 8,239 blocks ==25675== total heap usage: 53,103 allocs, 44,864 frees, 1,339,233,418 bytes allocated ==25675== ==25675== LEAK SUMMARY: ==25675== definitely lost: 0 bytes in 0 blocks ==25675== indirectly lost: 0 bytes in 0 blocks ==25675== possibly lost: 0 bytes in 0 blocks ==25675== still reachable: 24 bytes in 2 blocks ==25675== suppressed: 618,391 bytes in 8,237 blocks ==25675== Reachable blocks (those to which a pointer was found) are not shown. ==25675== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25675== ==25675== For lists of detected and suppressed errors, rerun with: -s ==25675== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)