==25375== Memcheck, a memory error detector ==25375== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25375== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25375== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25375== Parent PID: 24048 ==25375== ==25375== ==25375== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25375== Open file descriptor 12: ==25375== at 0xF00707D: pipe (pipe.c:29) ==25375== by 0x1972907D: ??? ==25375== by 0x13CCD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25375== by 0xEC12418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25375== by 0xEBABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25375== by 0xD87FD38: PetscInitialize (pinit.c:924) ==25375== by 0xD753E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25375== by 0xD753EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25375== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25375== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25375== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25375== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25375== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25375== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25375== ==25375== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25375== at 0xF00BA1C: __open_nocancel (open64_nocancel.c:39) ==25375== by 0xEF8FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25375== by 0xEB0F822: ??? ==25375== by 0xEB0F96F: ??? ==25375== by 0x13D726DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25375== by 0x13D72938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25375== by 0x13D28922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25375== by 0x13CCD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25375== by 0xEC12418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25375== by 0xEBABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25375== by 0xD87FD38: PetscInitialize (pinit.c:924) ==25375== by 0xD753E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25375== by 0xD753EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25375== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25375== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25375== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25375== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25375== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25375== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25375== ==25375== Open file descriptor 145: ==25375== ==25375== ==25375== Open file descriptor 142: ==25375== ==25375== ==25375== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25375== ==25375== ==25375== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25375== ==25375== ==25375== ==25375== HEAP SUMMARY: ==25375== in use at exit: 618,447 bytes in 8,240 blocks ==25375== total heap usage: 547,377 allocs, 539,137 frees, 1,345,096,151 bytes allocated ==25375== ==25375== LEAK SUMMARY: ==25375== definitely lost: 0 bytes in 0 blocks ==25375== indirectly lost: 0 bytes in 0 blocks ==25375== possibly lost: 0 bytes in 0 blocks ==25375== still reachable: 56 bytes in 3 blocks ==25375== suppressed: 618,391 bytes in 8,237 blocks ==25375== Reachable blocks (those to which a pointer was found) are not shown. ==25375== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25375== ==25375== For lists of detected and suppressed errors, rerun with: -s ==25375== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)