==40191== Memcheck, a memory error detector ==40191== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40191== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40191== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellForCrypt -malloc_debug -malloc_dump -memory_info ==40191== Parent PID: 24048 ==40191== ==40191== ==40191== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40191== Open file descriptor 12: ==40191== at 0xF4D107D: pipe (pipe.c:29) ==40191== by 0x1B3EC07D: ??? ==40191== by 0x165EE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40191== by 0x12EBC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40191== by 0x12E55D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40191== by 0x11B4CD38: PetscInitialize (pinit.c:924) ==40191== by 0xEDD1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40191== by 0xEDD1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40191== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40191== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40191== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40191== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40191== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40191== by 0x118975: main (TestCellForCrypt.cpp:18) ==40191== ==40191== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40191== at 0xF4D5A1C: __open_nocancel (open64_nocancel.c:39) ==40191== by 0xF459BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40191== by 0xEE0F822: ??? ==40191== by 0xEE0F96F: ??? ==40191== by 0x166936DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40191== by 0x16693938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40191== by 0x16649922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40191== by 0x165EE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40191== by 0x12EBC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40191== by 0x12E55D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40191== by 0x11B4CD38: PetscInitialize (pinit.c:924) ==40191== by 0xEDD1E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40191== by 0xEDD1EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40191== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40191== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40191== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40191== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40191== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40191== by 0x118975: main (TestCellForCrypt.cpp:18) ==40191== ==40191== Open file descriptor 145: ==40191== ==40191== ==40191== Open file descriptor 142: ==40191== ==40191== ==40191== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellForCrypt_valgrind.txt ==40191== ==40191== ==40191== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40191== ==40191== ==40191== ==40191== HEAP SUMMARY: ==40191== in use at exit: 618,591 bytes in 8,241 blocks ==40191== total heap usage: 55,745 allocs, 47,504 frees, 1,339,536,292 bytes allocated ==40191== ==40191== LEAK SUMMARY: ==40191== definitely lost: 0 bytes in 0 blocks ==40191== indirectly lost: 0 bytes in 0 blocks ==40191== possibly lost: 0 bytes in 0 blocks ==40191== still reachable: 184 bytes in 4 blocks ==40191== suppressed: 618,407 bytes in 8,237 blocks ==40191== Reachable blocks (those to which a pointer was found) are not shown. ==40191== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40191== ==40191== For lists of detected and suppressed errors, rerun with: -s ==40191== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)