==24310== Memcheck, a memory error detector ==24310== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24310== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24310== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==24310== Parent PID: 24048 ==24310== ==24310== ==24310== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24310== Open file descriptor 12: ==24310== at 0x61ED07D: pipe (pipe.c:29) ==24310== by 0xAF2A07D: ??? ==24310== by 0x8A404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24310== by 0x5E3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24310== by 0x5DD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24310== by 0x4AA7D38: PetscInitialize (pinit.c:924) ==24310== by 0x497BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24310== by 0x497BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24310== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24310== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24310== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24310== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24310== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24310== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==24310== ==24310== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24310== at 0x61F1A1C: __open_nocancel (open64_nocancel.c:39) ==24310== by 0x6175BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24310== by 0x5D37822: ??? ==24310== by 0x5D3796F: ??? ==24310== by 0x8AE76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24310== by 0x8AE7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24310== by 0x8A9D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24310== by 0x8A402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24310== by 0x5E3C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24310== by 0x5DD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24310== by 0x4AA7D38: PetscInitialize (pinit.c:924) ==24310== by 0x497BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24310== by 0x497BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24310== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24310== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24310== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24310== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24310== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24310== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==24310== ==24310== Open file descriptor 145: ==24310== ==24310== ==24310== Open file descriptor 142: ==24310== ==24310== ==24310== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==24310== ==24310== ==24310== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24310== ==24310== ==24310== ==24310== HEAP SUMMARY: ==24310== in use at exit: 617,967 bytes in 8,239 blocks ==24310== total heap usage: 61,712 allocs, 53,473 frees, 1,341,512,740 bytes allocated ==24310== ==24310== LEAK SUMMARY: ==24310== definitely lost: 0 bytes in 0 blocks ==24310== indirectly lost: 0 bytes in 0 blocks ==24310== possibly lost: 0 bytes in 0 blocks ==24310== still reachable: 24 bytes in 2 blocks ==24310== suppressed: 617,943 bytes in 8,237 blocks ==24310== Reachable blocks (those to which a pointer was found) are not shown. ==24310== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24310== ==24310== For lists of detected and suppressed errors, rerun with: -s ==24310== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)