==25560== Memcheck, a memory error detector ==25560== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25560== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25560== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25560== Parent PID: 24048 ==25560== ==25560== ==25560== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25560== Open file descriptor 12: ==25560== at 0x1110B07D: pipe (pipe.c:29) ==25560== by 0x1972A07D: ??? ==25560== by 0x14C8F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25560== by 0x109D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25560== by 0x1096AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25560== by 0xF63ED38: PetscInitialize (pinit.c:924) ==25560== by 0xF512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25560== by 0xF512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25560== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25560== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25560== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25560== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25560== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25560== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25560== ==25560== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25560== at 0x1110FA1C: __open_nocancel (open64_nocancel.c:39) ==25560== by 0x11093BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25560== by 0x108CE822: ??? ==25560== by 0x108CE96F: ??? ==25560== by 0x14D346DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25560== by 0x14D34938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25560== by 0x14CEA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25560== by 0x14C8F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25560== by 0x109D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25560== by 0x1096AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25560== by 0xF63ED38: PetscInitialize (pinit.c:924) ==25560== by 0xF512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25560== by 0xF512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25560== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25560== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25560== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25560== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25560== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25560== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25560== ==25560== Open file descriptor 145: ==25560== ==25560== ==25560== Open file descriptor 142: ==25560== ==25560== ==25560== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==25560== ==25560== ==25560== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25560== ==25560== ==25560== ==25560== HEAP SUMMARY: ==25560== in use at exit: 618,370 bytes in 8,236 blocks ==25560== total heap usage: 5,634,856 allocs, 5,626,620 frees, 1,933,092,333 bytes allocated ==25560== ==25560== LEAK SUMMARY: ==25560== definitely lost: 0 bytes in 0 blocks ==25560== indirectly lost: 0 bytes in 0 blocks ==25560== possibly lost: 0 bytes in 0 blocks ==25560== still reachable: 56 bytes in 3 blocks ==25560== suppressed: 618,314 bytes in 8,233 blocks ==25560== Reachable blocks (those to which a pointer was found) are not shown. ==25560== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25560== ==25560== For lists of detected and suppressed errors, rerun with: -s ==25560== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 32 from 32)