==42358== Memcheck, a memory error detector ==42358== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42358== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42358== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestIonicModelsWithSacs -malloc_debug -malloc_dump -memory_info ==42358== Parent PID: 24048 ==42358== ==42358== ==42358== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42358== Open file descriptor 12: ==42358== at 0x9C7907D: pipe (pipe.c:29) ==42358== by 0x1434207D: ??? ==42358== by 0xEE3B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42358== by 0x98AC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42358== by 0x9845D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42358== by 0x8519D38: PetscInitialize (pinit.c:924) ==42358== by 0x83EDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42358== by 0x83EDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42358== by 0x11A0FF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42358== by 0x1145B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42358== by 0x116CB2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42358== by 0x116BAD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42358== by 0x1171C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42358== by 0x112DB5: main (TestIonicModelsWithSacs.cpp:18) ==42358== ==42358== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42358== at 0x9C7DA1C: __open_nocancel (open64_nocancel.c:39) ==42358== by 0x9C01BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42358== by 0x97A9822: ??? ==42358== by 0x97A996F: ??? ==42358== by 0xEEE26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42358== by 0xEEE2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42358== by 0xEE98922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42358== by 0xEE3B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42358== by 0x98AC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42358== by 0x9845D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42358== by 0x8519D38: PetscInitialize (pinit.c:924) ==42358== by 0x83EDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42358== by 0x83EDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42358== by 0x11A0FF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42358== by 0x1145B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42358== by 0x116CB2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42358== by 0x116BAD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42358== by 0x1171C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42358== by 0x112DB5: main (TestIonicModelsWithSacs.cpp:18) ==42358== ==42358== Open file descriptor 145: ==42358== ==42358== ==42358== Open file descriptor 142: ==42358== ==42358== ==42358== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestIonicModelsWithSacs_valgrind.txt ==42358== ==42358== ==42358== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42358== ==42358== ==42358== ==42358== HEAP SUMMARY: ==42358== in use at exit: 618,431 bytes in 8,239 blocks ==42358== total heap usage: 481,202 allocs, 472,963 frees, 1,442,705,625 bytes allocated ==42358== ==42358== LEAK SUMMARY: ==42358== definitely lost: 0 bytes in 0 blocks ==42358== indirectly lost: 0 bytes in 0 blocks ==42358== possibly lost: 0 bytes in 0 blocks ==42358== still reachable: 24 bytes in 2 blocks ==42358== suppressed: 618,407 bytes in 8,237 blocks ==42358== Reachable blocks (those to which a pointer was found) are not shown. ==42358== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42358== ==42358== For lists of detected and suppressed errors, rerun with: -s ==42358== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)