==38904== Memcheck, a memory error detector ==38904== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==38904== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==38904== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestStepSizeException -malloc_debug -malloc_dump -memory_info ==38904== Parent PID: 24048 ==38904== ==38904== ==38904== FILE DESCRIPTORS: 9 open (3 std) at exit. ==38904== Open file descriptor 12: ==38904== at 0x4CC507D: pipe (pipe.c:29) ==38904== by 0xAEB707D: ??? ==38904== by 0x89CD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==38904== by 0x623E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38904== by 0x61D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38904== by 0x4ECED38: PetscInitialize (pinit.c:924) ==38904== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==38904== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==38904== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==38904== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==38904== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==38904== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==38904== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==38904== by 0x10D735: main (TestStepSizeException.cpp:19) ==38904== ==38904== Open file descriptor 8: /dev/shm/open_mpi.0000 ==38904== at 0x4CC9A1C: __open_nocancel (open64_nocancel.c:39) ==38904== by 0x4C4DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==38904== by 0x4946822: ??? ==38904== by 0x494696F: ??? ==38904== by 0x8A746DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38904== by 0x8A74938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38904== by 0x8A2A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==38904== by 0x89CD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==38904== by 0x623E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38904== by 0x61D7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==38904== by 0x4ECED38: PetscInitialize (pinit.c:924) ==38904== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==38904== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==38904== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==38904== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==38904== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==38904== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==38904== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==38904== by 0x10D735: main (TestStepSizeException.cpp:19) ==38904== ==38904== Open file descriptor 145: ==38904== ==38904== ==38904== Open file descriptor 142: ==38904== ==38904== ==38904== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestStepSizeException_valgrind.txt ==38904== ==38904== ==38904== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==38904== ==38904== ==38904== ==38904== HEAP SUMMARY: ==38904== in use at exit: 617,951 bytes in 8,239 blocks ==38904== total heap usage: 44,917 allocs, 36,678 frees, 1,338,497,580 bytes allocated ==38904== ==38904== LEAK SUMMARY: ==38904== definitely lost: 0 bytes in 0 blocks ==38904== indirectly lost: 0 bytes in 0 blocks ==38904== possibly lost: 0 bytes in 0 blocks ==38904== still reachable: 24 bytes in 2 blocks ==38904== suppressed: 617,927 bytes in 8,237 blocks ==38904== Reachable blocks (those to which a pointer was found) are not shown. ==38904== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==38904== ==38904== For lists of detected and suppressed errors, rerun with: -s ==38904== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)