==41545== Memcheck, a memory error detector ==41545== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41545== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41545== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==41545== Parent PID: 24074 ==41545== ==41545== ==41545== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41545== Open file descriptor 12: ==41545== at 0x87C207D: pipe (pipe.c:29) ==41545== by 0x1434207D: ??? ==41545== by 0xEE3B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41545== by 0x9EBD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41545== by 0x9E56D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41545== by 0x8B4DD38: PetscInitialize (pinit.c:924) ==41545== by 0x83EDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41545== by 0x83EDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41545== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41545== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41545== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41545== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41545== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41545== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41545== ==41545== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41545== at 0x87C6A1C: __open_nocancel (open64_nocancel.c:39) ==41545== by 0x874ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41545== by 0x842B822: ??? ==41545== by 0x842B96F: ??? ==41545== by 0xEEE26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41545== by 0xEEE2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41545== by 0xEE98922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41545== by 0xEE3B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41545== by 0x9EBD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41545== by 0x9E56D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41545== by 0x8B4DD38: PetscInitialize (pinit.c:924) ==41545== by 0x83EDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41545== by 0x83EDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41545== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41545== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41545== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41545== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41545== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41545== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==41545== ==41545== Open file descriptor 145: ==41545== ==41545== ==41545== Open file descriptor 142: ==41545== ==41545== ==41545== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==41545== ==41545== ==41545== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41545== ==41545== ==41545== ==41545== HEAP SUMMARY: ==41545== in use at exit: 621,959 bytes in 8,243 blocks ==41545== total heap usage: 3,054,221 allocs, 3,045,978 frees, 1,613,058,166 bytes allocated ==41545== ==41545== LEAK SUMMARY: ==41545== definitely lost: 0 bytes in 0 blocks ==41545== indirectly lost: 0 bytes in 0 blocks ==41545== possibly lost: 0 bytes in 0 blocks ==41545== still reachable: 3,629 bytes in 10 blocks ==41545== suppressed: 618,330 bytes in 8,233 blocks ==41545== Reachable blocks (those to which a pointer was found) are not shown. ==41545== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41545== ==41545== For lists of detected and suppressed errors, rerun with: -s ==41545== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)