==43118== Memcheck, a memory error detector ==43118== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43118== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43118== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCodegen -malloc_debug -malloc_dump -memory_info ==43118== Parent PID: 24671 ==43118== ==43118== ==43118== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43118== Open file descriptor 12: ==43118== at 0x9E1507D: pipe (pipe.c:29) ==43118== by 0x1434507D: ??? ==43118== by 0xEE3B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43118== by 0x9961418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43118== by 0x98FAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43118== by 0x85F1D38: PetscInitialize (pinit.c:924) ==43118== by 0x84C5E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43118== by 0x84C5EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43118== by 0x135779: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==43118== by 0x12FB0B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43118== by 0x132D44: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43118== by 0x132BE4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43118== by 0x13327B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43118== by 0x12ADA5: main (TestCodegen.cpp:19) ==43118== ==43118== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43118== at 0x9E19A1C: __open_nocancel (open64_nocancel.c:39) ==43118== by 0x9D9DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43118== by 0x80FD822: ??? ==43118== by 0x80FD96F: ??? ==43118== by 0xEEE26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43118== by 0xEEE2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43118== by 0xEE98922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43118== by 0xEE3B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43118== by 0x9961418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43118== by 0x98FAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43118== by 0x85F1D38: PetscInitialize (pinit.c:924) ==43118== by 0x84C5E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43118== by 0x84C5EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43118== by 0x135779: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==43118== by 0x12FB0B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43118== by 0x132D44: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43118== by 0x132BE4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43118== by 0x13327B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43118== by 0x12ADA5: main (TestCodegen.cpp:19) ==43118== ==43118== Open file descriptor 145: ==43118== ==43118== ==43118== Open file descriptor 142: ==43118== ==43118== ==43118== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCodegen_valgrind.txt ==43118== ==43118== ==43118== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43118== ==43118== ==43118== ==43118== HEAP SUMMARY: ==43118== in use at exit: 623,697 bytes in 8,247 blocks ==43118== total heap usage: 941,059 allocs, 932,812 frees, 2,144,435,186 bytes allocated ==43118== ==43118== LEAK SUMMARY: ==43118== definitely lost: 0 bytes in 0 blocks ==43118== indirectly lost: 0 bytes in 0 blocks ==43118== possibly lost: 0 bytes in 0 blocks ==43118== still reachable: 5,367 bytes in 14 blocks ==43118== suppressed: 618,330 bytes in 8,233 blocks ==43118== Reachable blocks (those to which a pointer was found) are not shown. ==43118== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43118== ==43118== For lists of detected and suppressed errors, rerun with: -s ==43118== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)