==41022== Memcheck, a memory error detector ==41022== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41022== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41022== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==41022== Parent PID: 24671 ==41022== ==41022== ==41022== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41022== Open file descriptor 12: ==41022== at 0x1126007D: pipe (pipe.c:29) ==41022== by 0x1B3EC07D: ??? ==41022== by 0x165EE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41022== by 0x12EBC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41022== by 0x12E55D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41022== by 0x11B4CD38: PetscInitialize (pinit.c:924) ==41022== by 0x10A9AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41022== by 0x10A9AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41022== by 0x23B3A8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41022== by 0x231879: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41022== by 0x235FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41022== by 0x235E4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41022== by 0x2364E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41022== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==41022== ==41022== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41022== at 0x11264A1C: __open_nocancel (open64_nocancel.c:39) ==41022== by 0x111E8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41022== by 0x611C822: ??? ==41022== by 0x611C96F: ??? ==41022== by 0x166936DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41022== by 0x16693938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41022== by 0x16649922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41022== by 0x165EE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41022== by 0x12EBC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41022== by 0x12E55D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41022== by 0x11B4CD38: PetscInitialize (pinit.c:924) ==41022== by 0x10A9AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41022== by 0x10A9AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41022== by 0x23B3A8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41022== by 0x231879: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41022== by 0x235FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41022== by 0x235E4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41022== by 0x2364E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41022== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==41022== ==41022== Open file descriptor 145: ==41022== ==41022== ==41022== Open file descriptor 142: ==41022== ==41022== ==41022== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==41022== ==41022== ==41022== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41022== ==41022== ==41022== ==41022== HEAP SUMMARY: ==41022== in use at exit: 618,386 bytes in 8,236 blocks ==41022== total heap usage: 6,310,792 allocs, 6,302,556 frees, 2,059,218,649 bytes allocated ==41022== ==41022== LEAK SUMMARY: ==41022== definitely lost: 0 bytes in 0 blocks ==41022== indirectly lost: 0 bytes in 0 blocks ==41022== possibly lost: 0 bytes in 0 blocks ==41022== still reachable: 56 bytes in 3 blocks ==41022== suppressed: 618,330 bytes in 8,233 blocks ==41022== Reachable blocks (those to which a pointer was found) are not shown. ==41022== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41022== ==41022== For lists of detected and suppressed errors, rerun with: -s ==41022== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)