==26203== Memcheck, a memory error detector ==26203== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26203== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26203== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==26203== Parent PID: 24671 ==26203== ==26203== ==26203== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26203== Open file descriptor 12: ==26203== at 0x110C907D: pipe (pipe.c:29) ==26203== by 0x1972A07D: ??? ==26203== by 0x14C8F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26203== by 0x109D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26203== by 0x1096AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26203== by 0xF63ED38: PetscInitialize (pinit.c:924) ==26203== by 0xF512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26203== by 0xF512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26203== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26203== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26203== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26203== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26203== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26203== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==26203== ==26203== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26203== at 0x110CDA1C: __open_nocancel (open64_nocancel.c:39) ==26203== by 0x11051BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26203== by 0x108C8822: ??? ==26203== by 0x108C896F: ??? ==26203== by 0x14D346DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26203== by 0x14D34938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26203== by 0x14CEA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26203== by 0x14C8F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26203== by 0x109D1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26203== by 0x1096AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26203== by 0xF63ED38: PetscInitialize (pinit.c:924) ==26203== by 0xF512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26203== by 0xF512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26203== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26203== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26203== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26203== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26203== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26203== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==26203== ==26203== Open file descriptor 145: ==26203== ==26203== ==26203== Open file descriptor 142: ==26203== ==26203== ==26203== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==26203== ==26203== ==26203== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26203== ==26203== ==26203== ==26203== HEAP SUMMARY: ==26203== in use at exit: 618,370 bytes in 8,236 blocks ==26203== total heap usage: 7,866,176 allocs, 7,857,940 frees, 2,189,205,018 bytes allocated ==26203== ==26203== LEAK SUMMARY: ==26203== definitely lost: 0 bytes in 0 blocks ==26203== indirectly lost: 0 bytes in 0 blocks ==26203== possibly lost: 0 bytes in 0 blocks ==26203== still reachable: 56 bytes in 3 blocks ==26203== suppressed: 618,314 bytes in 8,233 blocks ==26203== Reachable blocks (those to which a pointer was found) are not shown. ==26203== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26203== ==26203== For lists of detected and suppressed errors, rerun with: -s ==26203== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)