==25537== Memcheck, a memory error detector ==25537== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25537== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25537== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25537== Parent PID: 24129 ==25537== ==25537== ==25537== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25537== Open file descriptor 12: ==25537== at 0xF87507D: pipe (pipe.c:29) ==25537== by 0x1972907D: ??? ==25537== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25537== by 0x1016D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25537== by 0x10106D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25537== by 0x102F6D38: PetscInitialize (pinit.c:924) ==25537== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25537== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25537== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25537== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25537== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25537== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25537== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25537== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25537== ==25537== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25537== at 0xF879A1C: __open_nocancel (open64_nocancel.c:39) ==25537== by 0xF7FDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25537== by 0xF1AD822: ??? ==25537== by 0xF1AD96F: ??? ==25537== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25537== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25537== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25537== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25537== by 0x1016D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25537== by 0x10106D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25537== by 0x102F6D38: PetscInitialize (pinit.c:924) ==25537== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25537== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25537== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25537== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25537== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25537== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25537== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25537== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25537== ==25537== Open file descriptor 145: ==25537== ==25537== ==25537== Open file descriptor 142: ==25537== ==25537== ==25537== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25537== ==25537== ==25537== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25537== ==25537== ==25537== ==25537== HEAP SUMMARY: ==25537== in use at exit: 618,511 bytes in 8,241 blocks ==25537== total heap usage: 69,392 allocs, 61,151 frees, 1,341,035,418 bytes allocated ==25537== ==25537== LEAK SUMMARY: ==25537== definitely lost: 0 bytes in 0 blocks ==25537== indirectly lost: 0 bytes in 0 blocks ==25537== possibly lost: 0 bytes in 0 blocks ==25537== still reachable: 120 bytes in 4 blocks ==25537== suppressed: 618,391 bytes in 8,237 blocks ==25537== Reachable blocks (those to which a pointer was found) are not shown. ==25537== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25537== ==25537== For lists of detected and suppressed errors, rerun with: -s ==25537== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)