==24658== Memcheck, a memory error detector ==24658== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24658== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24658== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestHoneycombMeshGenerator -malloc_debug -malloc_dump -memory_info ==24658== Parent PID: 24129 ==24658== ==24658== ==24658== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24658== Open file descriptor 12: ==24658== at 0x820A07D: pipe (pipe.c:29) ==24658== by 0x100DE07D: ??? ==24658== by 0xBA704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24658== by 0x7D72418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24658== by 0x7D0BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24658== by 0x6A02D38: PetscInitialize (pinit.c:924) ==24658== by 0x656CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24658== by 0x656CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24658== by 0x11D935: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24658== by 0x1187CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24658== by 0x11B508: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24658== by 0x11B3A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24658== by 0x11BA3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24658== by 0x116BF5: main (TestHoneycombMeshGenerator.cpp:19) ==24658== ==24658== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24658== at 0x820EA1C: __open_nocancel (open64_nocancel.c:39) ==24658== by 0x8192BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24658== by 0x65A4822: ??? ==24658== by 0x65A496F: ??? ==24658== by 0xBB156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24658== by 0xBB15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24658== by 0xBACB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24658== by 0xBA702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24658== by 0x7D72418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24658== by 0x7D0BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24658== by 0x6A02D38: PetscInitialize (pinit.c:924) ==24658== by 0x656CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24658== by 0x656CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24658== by 0x11D935: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24658== by 0x1187CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24658== by 0x11B508: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24658== by 0x11B3A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24658== by 0x11BA3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24658== by 0x116BF5: main (TestHoneycombMeshGenerator.cpp:19) ==24658== ==24658== Open file descriptor 145: ==24658== ==24658== ==24658== Open file descriptor 142: ==24658== ==24658== ==24658== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHoneycombMeshGenerator_valgrind.txt ==24658== ==24658== ==24658== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24658== ==24658== ==24658== ==24658== HEAP SUMMARY: ==24658== in use at exit: 620,871 bytes in 8,240 blocks ==24658== total heap usage: 1,200,547 allocs, 1,192,307 frees, 1,379,335,707 bytes allocated ==24658== ==24658== LEAK SUMMARY: ==24658== definitely lost: 0 bytes in 0 blocks ==24658== indirectly lost: 0 bytes in 0 blocks ==24658== possibly lost: 0 bytes in 0 blocks ==24658== still reachable: 2,576 bytes in 3 blocks ==24658== suppressed: 618,295 bytes in 8,237 blocks ==24658== Reachable blocks (those to which a pointer was found) are not shown. ==24658== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24658== ==24658== For lists of detected and suppressed errors, rerun with: -s ==24658== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)