==40884== Memcheck, a memory error detector ==40884== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40884== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40884== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestSimpleImpedanceProblem -malloc_debug -malloc_dump -memory_info ==40884== Parent PID: 24129 ==40884== ==40884== ==40884== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40884== Open file descriptor 12: ==40884== at 0x6D8C07D: pipe (pipe.c:29) ==40884== by 0x107C007D: ??? ==40884== by 0x9ABB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40884== by 0x6F89418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40884== by 0x6F22D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40884== by 0x70CED38: PetscInitialize (pinit.c:924) ==40884== by 0x668CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40884== by 0x668CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40884== by 0x11C118: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40884== by 0x1176AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40884== by 0x11A176: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40884== by 0x11A016: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40884== by 0x11A6AD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40884== by 0x115AD5: main (TestSimpleImpedanceProblem.cpp:19) ==40884== ==40884== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40884== at 0x6D90A1C: __open_nocancel (open64_nocancel.c:39) ==40884== by 0x6D14BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40884== by 0x66C4822: ??? ==40884== by 0x66C496F: ??? ==40884== by 0x9B606DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40884== by 0x9B60938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40884== by 0x9B16922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40884== by 0x9ABB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40884== by 0x6F89418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40884== by 0x6F22D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40884== by 0x70CED38: PetscInitialize (pinit.c:924) ==40884== by 0x668CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40884== by 0x668CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40884== by 0x11C118: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40884== by 0x1176AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40884== by 0x11A176: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40884== by 0x11A016: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40884== by 0x11A6AD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40884== by 0x115AD5: main (TestSimpleImpedanceProblem.cpp:19) ==40884== ==40884== Open file descriptor 145: ==40884== ==40884== ==40884== Open file descriptor 142: ==40884== ==40884== ==40884== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleImpedanceProblem_valgrind.txt ==40884== ==40884== ==40884== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40884== ==40884== ==40884== ==40884== HEAP SUMMARY: ==40884== in use at exit: 618,338 bytes in 8,235 blocks ==40884== total heap usage: 7,105,343 allocs, 7,097,108 frees, 1,601,718,893 bytes allocated ==40884== ==40884== LEAK SUMMARY: ==40884== definitely lost: 0 bytes in 0 blocks ==40884== indirectly lost: 0 bytes in 0 blocks ==40884== possibly lost: 0 bytes in 0 blocks ==40884== still reachable: 24 bytes in 2 blocks ==40884== suppressed: 618,314 bytes in 8,233 blocks ==40884== Reachable blocks (those to which a pointer was found) are not shown. ==40884== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40884== ==40884== For lists of detected and suppressed errors, rerun with: -s ==40884== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)