==39618== Memcheck, a memory error detector ==39618== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39618== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39618== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVolumeTrackingModifier -malloc_debug -malloc_dump -memory_info ==39618== Parent PID: 24129 ==39618== ==39618== ==39618== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39618== Open file descriptor 12: ==39618== at 0xF8B707D: pipe (pipe.c:29) ==39618== by 0x1972907D: ??? ==39618== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39618== by 0x101B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39618== by 0x1014AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39618== by 0x102F6D38: PetscInitialize (pinit.c:924) ==39618== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39618== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39618== by 0x20339E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39618== by 0x1FB7BF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39618== by 0x1FEF52: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39618== by 0x1FEE4D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39618== by 0x1FF461: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39618== by 0x1F9FB5: main (TestVolumeTrackingModifier.cpp:18) ==39618== ==39618== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39618== at 0xF8BBA1C: __open_nocancel (open64_nocancel.c:39) ==39618== by 0xF83FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39618== by 0xF1AD822: ??? ==39618== by 0xF1AD96F: ??? ==39618== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39618== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39618== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39618== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39618== by 0x101B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39618== by 0x1014AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39618== by 0x102F6D38: PetscInitialize (pinit.c:924) ==39618== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39618== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39618== by 0x20339E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39618== by 0x1FB7BF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39618== by 0x1FEF52: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39618== by 0x1FEE4D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39618== by 0x1FF461: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39618== by 0x1F9FB5: main (TestVolumeTrackingModifier.cpp:18) ==39618== ==39618== Open file descriptor 145: ==39618== ==39618== ==39618== Open file descriptor 142: ==39618== ==39618== ==39618== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVolumeTrackingModifier_valgrind.txt ==39618== ==39618== ==39618== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39618== ==39618== ==39618== ==39618== HEAP SUMMARY: ==39618== in use at exit: 618,386 bytes in 8,237 blocks ==39618== total heap usage: 11,631,017 allocs, 11,622,780 frees, 3,070,560,304 bytes allocated ==39618== ==39618== LEAK SUMMARY: ==39618== definitely lost: 0 bytes in 0 blocks ==39618== indirectly lost: 0 bytes in 0 blocks ==39618== possibly lost: 0 bytes in 0 blocks ==39618== still reachable: 72 bytes in 4 blocks ==39618== suppressed: 618,314 bytes in 8,233 blocks ==39618== Reachable blocks (those to which a pointer was found) are not shown. ==39618== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39618== ==39618== For lists of detected and suppressed errors, rerun with: -s ==39618== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)