==41360== Memcheck, a memory error detector ==41360== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41360== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41360== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeCells -malloc_debug -malloc_dump -memory_info ==41360== Parent PID: 24157 ==41360== ==41360== ==41360== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41360== Open file descriptor 12: ==41360== at 0x9D2E07D: pipe (pipe.c:29) ==41360== by 0x1434207D: ??? ==41360== by 0xEE3B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41360== by 0x997B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41360== by 0x9914D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41360== by 0x8258D38: PetscInitialize (pinit.c:924) ==41360== by 0x9843E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41360== by 0x9843EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41360== by 0x1353CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41360== by 0x12FB8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41360== by 0x132882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41360== by 0x132722: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41360== by 0x132DB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41360== by 0x12AB65: main (TestCvodeCells.cpp:19) ==41360== ==41360== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41360== at 0x9D32A1C: __open_nocancel (open64_nocancel.c:39) ==41360== by 0x9CB6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41360== by 0x80FD822: ??? ==41360== by 0x80FD96F: ??? ==41360== by 0xEEE26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41360== by 0xEEE2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41360== by 0xEE98922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41360== by 0xEE3B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41360== by 0x997B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41360== by 0x9914D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41360== by 0x8258D38: PetscInitialize (pinit.c:924) ==41360== by 0x9843E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41360== by 0x9843EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41360== by 0x1353CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41360== by 0x12FB8B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41360== by 0x132882: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41360== by 0x132722: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41360== by 0x132DB9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41360== by 0x12AB65: main (TestCvodeCells.cpp:19) ==41360== ==41360== Open file descriptor 145: ==41360== ==41360== ==41360== Open file descriptor 142: ==41360== ==41360== ==41360== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeCells_valgrind.txt ==41360== ==41360== ==41360== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41360== ==41360== ==41360== ==41360== HEAP SUMMARY: ==41360== in use at exit: 620,125 bytes in 8,239 blocks ==41360== total heap usage: 231,023 allocs, 222,784 frees, 1,364,251,326 bytes allocated ==41360== ==41360== LEAK SUMMARY: ==41360== definitely lost: 0 bytes in 0 blocks ==41360== indirectly lost: 0 bytes in 0 blocks ==41360== possibly lost: 0 bytes in 0 blocks ==41360== still reachable: 1,795 bytes in 6 blocks ==41360== suppressed: 618,330 bytes in 8,233 blocks ==41360== Reachable blocks (those to which a pointer was found) are not shown. ==41360== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41360== ==41360== For lists of detected and suppressed errors, rerun with: -s ==41360== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)