==25677== Memcheck, a memory error detector ==25677== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25677== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25677== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25677== Parent PID: 24157 ==25677== ==25677== ==25677== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25677== Open file descriptor 12: ==25677== at 0x1110B07D: pipe (pipe.c:29) ==25677== by 0x1972A07D: ??? ==25677== by 0x14CDE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25677== by 0x10D58418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25677== by 0x10CF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25677== by 0xF9E8D38: PetscInitialize (pinit.c:924) ==25677== by 0xF512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25677== by 0xF512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25677== by 0x1368E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25677== by 0x131283: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25677== by 0x133EC6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25677== by 0x133DC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25677== by 0x1343D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25677== by 0x12FA85: main (TestParabolicBoxDomainPdeModifier.cpp:18) ==25677== ==25677== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25677== at 0x1110FA1C: __open_nocancel (open64_nocancel.c:39) ==25677== by 0x11093BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25677== by 0xF54A822: ??? ==25677== by 0xF54A96F: ??? ==25677== by 0x14D836DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25677== by 0x14D83938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25677== by 0x14D39922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25677== by 0x14CDE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25677== by 0x10D58418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25677== by 0x10CF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25677== by 0xF9E8D38: PetscInitialize (pinit.c:924) ==25677== by 0xF512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25677== by 0xF512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25677== by 0x1368E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25677== by 0x131283: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25677== by 0x133EC6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25677== by 0x133DC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25677== by 0x1343D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25677== by 0x12FA85: main (TestParabolicBoxDomainPdeModifier.cpp:18) ==25677== ==25677== Open file descriptor 145: ==25677== ==25677== ==25677== Open file descriptor 142: ==25677== ==25677== ==25677== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParabolicBoxDomainPdeModifier_valgrind.txt ==25677== ==25677== ==25677== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25677== ==25677== ==25677== ==25677== HEAP SUMMARY: ==25677== in use at exit: 618,370 bytes in 8,236 blocks ==25677== total heap usage: 3,645,896 allocs, 3,637,660 frees, 1,737,274,756 bytes allocated ==25677== ==25677== LEAK SUMMARY: ==25677== definitely lost: 0 bytes in 0 blocks ==25677== indirectly lost: 0 bytes in 0 blocks ==25677== possibly lost: 0 bytes in 0 blocks ==25677== still reachable: 56 bytes in 3 blocks ==25677== suppressed: 618,314 bytes in 8,233 blocks ==25677== Reachable blocks (those to which a pointer was found) are not shown. ==25677== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25677== ==25677== For lists of detected and suppressed errors, rerun with: -s ==25677== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)