==42781== Memcheck, a memory error detector ==42781== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42781== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42781== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestRushLarsen -malloc_debug -malloc_dump -memory_info ==42781== Parent PID: 24157 ==42781== ==42781== ==42781== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42781== Open file descriptor 12: ==42781== at 0x9C7907D: pipe (pipe.c:29) ==42781== by 0x1434407D: ??? ==42781== by 0xEE3B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42781== by 0x98C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42781== by 0x985FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42781== by 0x81F1D38: PetscInitialize (pinit.c:924) ==42781== by 0x976BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42781== by 0x976BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42781== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42781== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42781== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42781== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42781== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42781== by 0x114C35: main (TestRushLarsen.cpp:18) ==42781== ==42781== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42781== at 0x9C7DA1C: __open_nocancel (open64_nocancel.c:39) ==42781== by 0x9C01BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42781== by 0x97A3822: ??? ==42781== by 0x97A396F: ??? ==42781== by 0xEEE06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42781== by 0xEEE0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42781== by 0xEE96922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42781== by 0xEE3B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42781== by 0x98C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42781== by 0x985FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42781== by 0x81F1D38: PetscInitialize (pinit.c:924) ==42781== by 0x976BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42781== by 0x976BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42781== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42781== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42781== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42781== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42781== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42781== by 0x114C35: main (TestRushLarsen.cpp:18) ==42781== ==42781== Open file descriptor 145: ==42781== ==42781== ==42781== Open file descriptor 142: ==42781== ==42781== ==42781== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRushLarsen_valgrind.txt ==42781== ==42781== ==42781== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42781== ==42781== ==42781== ==42781== HEAP SUMMARY: ==42781== in use at exit: 621,905 bytes in 8,243 blocks ==42781== total heap usage: 1,051,897 allocs, 1,043,654 frees, 1,779,189,891 bytes allocated ==42781== ==42781== LEAK SUMMARY: ==42781== definitely lost: 0 bytes in 0 blocks ==42781== indirectly lost: 0 bytes in 0 blocks ==42781== possibly lost: 0 bytes in 0 blocks ==42781== still reachable: 3,575 bytes in 10 blocks ==42781== suppressed: 618,330 bytes in 8,233 blocks ==42781== Reachable blocks (those to which a pointer was found) are not shown. ==42781== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42781== ==42781== For lists of detected and suppressed errors, rerun with: -s ==42781== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)