==43598== Memcheck, a memory error detector ==43598== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43598== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43598== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==43598== Parent PID: 24244 ==43598== ==43598== ==43598== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43598== Open file descriptor 12: ==43598== at 0xA8C80ED: pipe (pipe.c:29) ==43598== by 0x1434607D: ??? ==43598== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43598== by 0xAC94418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43598== by 0xAC2DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43598== by 0xB171D38: PetscInitialize (pinit.c:924) ==43598== by 0xA1ACE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43598== by 0xA1ACEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43598== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43598== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43598== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43598== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43598== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43598== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43598== ==43598== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43598== at 0xA8CCA8C: __open_nocancel (open64_nocancel.c:39) ==43598== by 0xA850BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43598== by 0xA1EA822: ??? ==43598== by 0xA1EA96F: ??? ==43598== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43598== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43598== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43598== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43598== by 0xAC94418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43598== by 0xAC2DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43598== by 0xB171D38: PetscInitialize (pinit.c:924) ==43598== by 0xA1ACE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43598== by 0xA1ACEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43598== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43598== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43598== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43598== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43598== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43598== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43598== ==43598== Open file descriptor 145: ==43598== ==43598== ==43598== Open file descriptor 142: ==43598== ==43598== ==43598== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==43598== ==43598== ==43598== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43598== ==43598== ==43598== ==43598== HEAP SUMMARY: ==43598== in use at exit: 618,407 bytes in 8,239 blocks ==43598== total heap usage: 120,273 allocs, 112,034 frees, 1,366,535,866 bytes allocated ==43598== ==43598== LEAK SUMMARY: ==43598== definitely lost: 0 bytes in 0 blocks ==43598== indirectly lost: 0 bytes in 0 blocks ==43598== possibly lost: 0 bytes in 0 blocks ==43598== still reachable: 24 bytes in 2 blocks ==43598== suppressed: 618,383 bytes in 8,237 blocks ==43598== Reachable blocks (those to which a pointer was found) are not shown. ==43598== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43598== ==43598== For lists of detected and suppressed errors, rerun with: -s ==43598== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)