==40883== Memcheck, a memory error detector ==40883== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40883== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40883== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestPottsBasedCryptSimulation -malloc_debug -malloc_dump -memory_info ==40883== Parent PID: 24244 ==40883== ==40883== ==40883== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40883== Open file descriptor 12: ==40883== at 0x111350ED: pipe (pipe.c:29) ==40883== by 0x1B3F007D: ??? ==40883== by 0x144324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40883== by 0x11B58418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40883== by 0x11AF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40883== by 0x11C9DD38: PetscInitialize (pinit.c:924) ==40883== by 0x10A35E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40883== by 0x10A35EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40883== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40883== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40883== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40883== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40883== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40883== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40883== ==40883== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40883== at 0x11139A8C: __open_nocancel (open64_nocancel.c:39) ==40883== by 0x110BDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40883== by 0x10A73822: ??? ==40883== by 0x10A7396F: ??? ==40883== by 0x144D76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40883== by 0x144D7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40883== by 0x1448D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40883== by 0x144322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40883== by 0x11B58418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40883== by 0x11AF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40883== by 0x11C9DD38: PetscInitialize (pinit.c:924) ==40883== by 0x10A35E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40883== by 0x10A35EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40883== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40883== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40883== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40883== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40883== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40883== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40883== ==40883== Open file descriptor 145: ==40883== ==40883== ==40883== Open file descriptor 142: ==40883== ==40883== ==40883== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCryptSimulation_valgrind.txt ==40883== ==40883== ==40883== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40883== ==40883== ==40883== ==40883== HEAP SUMMARY: ==40883== in use at exit: 618,446 bytes in 8,237 blocks ==40883== total heap usage: 46,840,634 allocs, 46,832,397 frees, 5,592,954,530 bytes allocated ==40883== ==40883== LEAK SUMMARY: ==40883== definitely lost: 0 bytes in 0 blocks ==40883== indirectly lost: 0 bytes in 0 blocks ==40883== possibly lost: 0 bytes in 0 blocks ==40883== still reachable: 136 bytes in 4 blocks ==40883== suppressed: 618,310 bytes in 8,233 blocks ==40883== Reachable blocks (those to which a pointer was found) are not shown. ==40883== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40883== ==40883== For lists of detected and suppressed errors, rerun with: -s ==40883== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)