==25932== Memcheck, a memory error detector ==25932== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25932== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25932== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellPopulationWriters -malloc_debug -malloc_dump -memory_info ==25932== Parent PID: 24042 ==25932== ==25932== ==25932== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25932== Open file descriptor 12: ==25932== at 0xF8B70ED: pipe (pipe.c:29) ==25932== by 0x1972D07D: ??? ==25932== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25932== by 0x101B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25932== by 0x1014AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25932== by 0x102F6D38: PetscInitialize (pinit.c:924) ==25932== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25932== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25932== by 0x146C30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25932== by 0x13F5FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25932== by 0x14252E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25932== by 0x1423CE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25932== by 0x142A65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25932== by 0x13DA25: main (TestCellPopulationWriters.cpp:19) ==25932== ==25932== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25932== at 0xF8BBA8C: __open_nocancel (open64_nocancel.c:39) ==25932== by 0xF83FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25932== by 0xF1B3822: ??? ==25932== by 0xF1B396F: ??? ==25932== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25932== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25932== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25932== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25932== by 0x101B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25932== by 0x1014AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25932== by 0x102F6D38: PetscInitialize (pinit.c:924) ==25932== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25932== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25932== by 0x146C30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25932== by 0x13F5FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25932== by 0x14252E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25932== by 0x1423CE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25932== by 0x142A65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25932== by 0x13DA25: main (TestCellPopulationWriters.cpp:19) ==25932== ==25932== Open file descriptor 145: ==25932== ==25932== ==25932== Open file descriptor 142: ==25932== ==25932== ==25932== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellPopulationWriters_valgrind.txt ==25932== ==25932== ==25932== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25932== ==25932== ==25932== ==25932== HEAP SUMMARY: ==25932== in use at exit: 618,423 bytes in 8,240 blocks ==25932== total heap usage: 159,576 allocs, 151,336 frees, 1,399,491,155 bytes allocated ==25932== ==25932== LEAK SUMMARY: ==25932== definitely lost: 0 bytes in 0 blocks ==25932== indirectly lost: 0 bytes in 0 blocks ==25932== possibly lost: 0 bytes in 0 blocks ==25932== still reachable: 56 bytes in 3 blocks ==25932== suppressed: 618,367 bytes in 8,237 blocks ==25932== Reachable blocks (those to which a pointer was found) are not shown. ==25932== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25932== ==25932== For lists of detected and suppressed errors, rerun with: -s ==25932== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)