==24359== Memcheck, a memory error detector ==24359== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24359== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24359== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestParallelColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==24359== Parent PID: 24042 ==24359== ==24359== ==24359== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24359== Open file descriptor 12: ==24359== at 0x60B60ED: pipe (pipe.c:29) ==24359== by 0xAF2E07D: ??? ==24359== by 0x8A404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24359== by 0x62B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24359== by 0x624AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24359== by 0x49C3D38: PetscInitialize (pinit.c:924) ==24359== by 0x5CF9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24359== by 0x5CF9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24359== by 0x11B354: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==24359== by 0x114A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24359== by 0x1174D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24359== by 0x117378: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24359== by 0x117A0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24359== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==24359== ==24359== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24359== at 0x60BAA8C: __open_nocancel (open64_nocancel.c:39) ==24359== by 0x603EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24359== by 0x5D37822: ??? ==24359== by 0x5D3796F: ??? ==24359== by 0x8AE76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24359== by 0x8AE7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24359== by 0x8A9D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24359== by 0x8A402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24359== by 0x62B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24359== by 0x624AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24359== by 0x49C3D38: PetscInitialize (pinit.c:924) ==24359== by 0x5CF9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24359== by 0x5CF9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24359== by 0x11B354: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==24359== by 0x114A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24359== by 0x1174D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24359== by 0x117378: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24359== by 0x117A0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24359== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==24359== ==24359== Open file descriptor 145: ==24359== ==24359== ==24359== Open file descriptor 142: ==24359== ==24359== ==24359== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParallelColumnDataReaderWriter_valgrind.txt ==24359== ==24359== ==24359== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24359== ==24359== ==24359== ==24359== HEAP SUMMARY: ==24359== in use at exit: 617,927 bytes in 8,239 blocks ==24359== total heap usage: 46,060 allocs, 37,821 frees, 1,339,126,857 bytes allocated ==24359== ==24359== LEAK SUMMARY: ==24359== definitely lost: 0 bytes in 0 blocks ==24359== indirectly lost: 0 bytes in 0 blocks ==24359== possibly lost: 0 bytes in 0 blocks ==24359== still reachable: 24 bytes in 2 blocks ==24359== suppressed: 617,903 bytes in 8,237 blocks ==24359== Reachable blocks (those to which a pointer was found) are not shown. ==24359== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24359== ==24359== For lists of detected and suppressed errors, rerun with: -s ==24359== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)