==40906== Memcheck, a memory error detector ==40906== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40906== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40906== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayGenerator -malloc_debug -malloc_dump -memory_info ==40906== Parent PID: 24030 ==40906== ==40906== ==40906== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40906== Open file descriptor 12: ==40906== at 0x6BE20ED: pipe (pipe.c:29) ==40906== by 0x107C307D: ??? ==40906== by 0xBAE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40906== by 0x5EE7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40906== by 0x5E80D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40906== by 0x4A6ED38: PetscInitialize (pinit.c:924) ==40906== by 0x5DA6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40906== by 0x5DA6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40906== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40906== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40906== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40906== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40906== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40906== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==40906== ==40906== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40906== at 0x6BE6A8C: __open_nocancel (open64_nocancel.c:39) ==40906== by 0x6B6ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40906== by 0x5DE4822: ??? ==40906== by 0x5DE496F: ??? ==40906== by 0xBB886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40906== by 0xBB88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40906== by 0xBB3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40906== by 0xBAE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40906== by 0x5EE7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40906== by 0x5E80D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40906== by 0x4A6ED38: PetscInitialize (pinit.c:924) ==40906== by 0x5DA6E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40906== by 0x5DA6EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40906== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40906== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40906== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40906== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40906== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40906== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==40906== ==40906== Open file descriptor 145: ==40906== ==40906== ==40906== Open file descriptor 142: ==40906== ==40906== ==40906== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayGenerator_valgrind.txt ==40906== ==40906== ==40906== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40906== ==40906== ==40906== ==40906== HEAP SUMMARY: ==40906== in use at exit: 618,391 bytes in 8,239 blocks ==40906== total heap usage: 627,256 allocs, 619,017 frees, 1,787,400,758 bytes allocated ==40906== ==40906== LEAK SUMMARY: ==40906== definitely lost: 0 bytes in 0 blocks ==40906== indirectly lost: 0 bytes in 0 blocks ==40906== possibly lost: 0 bytes in 0 blocks ==40906== still reachable: 24 bytes in 2 blocks ==40906== suppressed: 618,367 bytes in 8,237 blocks ==40906== Reachable blocks (those to which a pointer was found) are not shown. ==40906== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40906== ==40906== For lists of detected and suppressed errors, rerun with: -s ==40906== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)