==41193== Memcheck, a memory error detector ==41193== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41193== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41193== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithSvi -malloc_debug -malloc_dump -memory_info ==41193== Parent PID: 24062 ==41193== ==41193== ==41193== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41193== Open file descriptor 12: ==41193== at 0xA7FC0ED: pipe (pipe.c:29) ==41193== by 0x1434707D: ??? ==41193== by 0xD5F64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41193== by 0xABC8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41193== by 0xAB61D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41193== by 0xB0A5D38: PetscInitialize (pinit.c:924) ==41193== by 0xA0E0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41193== by 0xA0E0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41193== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41193== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41193== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41193== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41193== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41193== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==41193== ==41193== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41193== at 0xA800A8C: __open_nocancel (open64_nocancel.c:39) ==41193== by 0xA784BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41193== by 0xA11E822: ??? ==41193== by 0xA11E96F: ??? ==41193== by 0xD69B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41193== by 0xD69B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41193== by 0xD651922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41193== by 0xD5F62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41193== by 0xABC8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41193== by 0xAB61D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41193== by 0xB0A5D38: PetscInitialize (pinit.c:924) ==41193== by 0xA0E0E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41193== by 0xA0E0EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41193== by 0x120EA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41193== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41193== by 0x11EA90: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41193== by 0x11E98B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41193== by 0x11EF9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41193== by 0x11AE75: main (TestBidomainWithSvi.cpp:18) ==41193== ==41193== Open file descriptor 145: ==41193== ==41193== ==41193== Open file descriptor 142: ==41193== ==41193== ==41193== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithSvi_valgrind.txt ==41193== ==41193== ==41193== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41193== ==41193== ==41193== ==41193== HEAP SUMMARY: ==41193== in use at exit: 638,449 bytes in 8,483 blocks ==41193== total heap usage: 3,540,566 allocs, 3,532,083 frees, 2,048,155,174 bytes allocated ==41193== ==41193== LEAK SUMMARY: ==41193== definitely lost: 0 bytes in 0 blocks ==41193== indirectly lost: 0 bytes in 0 blocks ==41193== possibly lost: 0 bytes in 0 blocks ==41193== still reachable: 24 bytes in 2 blocks ==41193== suppressed: 638,425 bytes in 8,481 blocks ==41193== Reachable blocks (those to which a pointer was found) are not shown. ==41193== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41193== ==41193== For lists of detected and suppressed errors, rerun with: -s ==41193== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 72 from 34)