==25549== Memcheck, a memory error detector ==25549== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25549== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25549== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25549== Parent PID: 24062 ==25549== ==25549== ==25549== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25549== Open file descriptor 12: ==25549== at 0x1110B0ED: pipe (pipe.c:29) ==25549== by 0x1972E07D: ??? ==25549== by 0x14CDE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25549== by 0x10D58418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25549== by 0x10CF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25549== by 0xF9E8D38: PetscInitialize (pinit.c:924) ==25549== by 0xF512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25549== by 0xF512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25549== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25549== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25549== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25549== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25549== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25549== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25549== ==25549== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25549== at 0x1110FA8C: __open_nocancel (open64_nocancel.c:39) ==25549== by 0x11093BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25549== by 0xF550822: ??? ==25549== by 0xF55096F: ??? ==25549== by 0x14D836DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25549== by 0x14D83938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25549== by 0x14D39922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25549== by 0x14CDE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25549== by 0x10D58418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25549== by 0x10CF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25549== by 0xF9E8D38: PetscInitialize (pinit.c:924) ==25549== by 0xF512E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25549== by 0xF512EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25549== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25549== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25549== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25549== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25549== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25549== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25549== ==25549== Open file descriptor 145: ==25549== ==25549== ==25549== Open file descriptor 142: ==25549== ==25549== ==25549== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==25549== ==25549== ==25549== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25549== ==25549== ==25549== ==25549== HEAP SUMMARY: ==25549== in use at exit: 637,985 bytes in 8,474 blocks ==25549== total heap usage: 5,635,386 allocs, 5,626,912 frees, 1,934,256,717 bytes allocated ==25549== ==25549== LEAK SUMMARY: ==25549== definitely lost: 0 bytes in 0 blocks ==25549== indirectly lost: 0 bytes in 0 blocks ==25549== possibly lost: 0 bytes in 0 blocks ==25549== still reachable: 56 bytes in 3 blocks ==25549== suppressed: 637,929 bytes in 8,471 blocks ==25549== Reachable blocks (those to which a pointer was found) are not shown. ==25549== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25549== ==25549== For lists of detected and suppressed errors, rerun with: -s ==25549== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)