==41237== Memcheck, a memory error detector ==41237== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41237== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41237== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==41237== Parent PID: 24062 ==41237== ==41237== ==41237== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41237== Open file descriptor 12: ==41237== at 0xA9A60ED: pipe (pipe.c:29) ==41237== by 0x1434707D: ??? ==41237== by 0xD95E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41237== by 0xA2AE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41237== by 0xA247D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41237== by 0xB118D38: PetscInitialize (pinit.c:924) ==41237== by 0xA153E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41237== by 0xA153EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41237== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41237== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41237== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41237== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41237== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41237== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==41237== ==41237== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41237== at 0xA9AAA8C: __open_nocancel (open64_nocancel.c:39) ==41237== by 0xA92EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41237== by 0xA191822: ??? ==41237== by 0xA19196F: ??? ==41237== by 0xDA036DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41237== by 0xDA03938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41237== by 0xD9B9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41237== by 0xD95E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41237== by 0xA2AE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41237== by 0xA247D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41237== by 0xB118D38: PetscInitialize (pinit.c:924) ==41237== by 0xA153E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41237== by 0xA153EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41237== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41237== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41237== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41237== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41237== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41237== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==41237== ==41237== Open file descriptor 145: ==41237== ==41237== ==41237== Open file descriptor 142: ==41237== ==41237== ==41237== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==41237== ==41237== ==41237== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41237== ==41237== ==41237== ==41237== HEAP SUMMARY: ==41237== in use at exit: 638,449 bytes in 8,483 blocks ==41237== total heap usage: 2,373,462 allocs, 2,364,979 frees, 2,469,788,392 bytes allocated ==41237== ==41237== LEAK SUMMARY: ==41237== definitely lost: 0 bytes in 0 blocks ==41237== indirectly lost: 0 bytes in 0 blocks ==41237== possibly lost: 0 bytes in 0 blocks ==41237== still reachable: 24 bytes in 2 blocks ==41237== suppressed: 638,425 bytes in 8,481 blocks ==41237== Reachable blocks (those to which a pointer was found) are not shown. ==41237== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41237== ==41237== For lists of detected and suppressed errors, rerun with: -s ==41237== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)