==43451== Memcheck, a memory error detector ==43451== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43451== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43451== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==43451== Parent PID: 24062 ==43451== ==43451== ==43451== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43451== Open file descriptor 12: ==43451== at 0xA8C80ED: pipe (pipe.c:29) ==43451== by 0x1434607D: ??? ==43451== by 0xD99D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43451== by 0xAC94418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43451== by 0xAC2DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43451== by 0xB171D38: PetscInitialize (pinit.c:924) ==43451== by 0xA1ACE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43451== by 0xA1ACEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43451== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43451== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43451== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43451== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43451== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43451== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43451== ==43451== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43451== at 0xA8CCA8C: __open_nocancel (open64_nocancel.c:39) ==43451== by 0xA850BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43451== by 0xA1EA822: ??? ==43451== by 0xA1EA96F: ??? ==43451== by 0xDA426DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43451== by 0xDA42938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43451== by 0xD9F8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43451== by 0xD99D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43451== by 0xAC94418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43451== by 0xAC2DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43451== by 0xB171D38: PetscInitialize (pinit.c:924) ==43451== by 0xA1ACE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43451== by 0xA1ACEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43451== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43451== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43451== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43451== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43451== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43451== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==43451== ==43451== Open file descriptor 145: ==43451== ==43451== ==43451== Open file descriptor 142: ==43451== ==43451== ==43451== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==43451== ==43451== ==43451== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43451== ==43451== ==43451== ==43451== HEAP SUMMARY: ==43451== in use at exit: 638,042 bytes in 8,477 blocks ==43451== total heap usage: 120,804 allocs, 112,327 frees, 1,367,699,876 bytes allocated ==43451== ==43451== LEAK SUMMARY: ==43451== definitely lost: 0 bytes in 0 blocks ==43451== indirectly lost: 0 bytes in 0 blocks ==43451== possibly lost: 0 bytes in 0 blocks ==43451== still reachable: 24 bytes in 2 blocks ==43451== suppressed: 638,018 bytes in 8,475 blocks ==43451== Reachable blocks (those to which a pointer was found) are not shown. ==43451== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43451== ==43451== For lists of detected and suppressed errors, rerun with: -s ==43451== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)