==25479== Memcheck, a memory error detector ==25479== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25479== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25479== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==25479== Parent PID: 24062 ==25479== ==25479== ==25479== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25479== Open file descriptor 12: ==25479== at 0xF0070ED: pipe (pipe.c:29) ==25479== by 0x1972D07D: ??? ==25479== by 0x13CCD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25479== by 0xEC54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25479== by 0xEBEDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25479== by 0xD8E4D38: PetscInitialize (pinit.c:924) ==25479== by 0xD753E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25479== by 0xD753EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25479== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25479== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25479== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25479== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25479== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25479== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25479== ==25479== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25479== at 0xF00BA8C: __open_nocancel (open64_nocancel.c:39) ==25479== by 0xEF8FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25479== by 0xD791822: ??? ==25479== by 0xD79196F: ??? ==25479== by 0x13D726DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25479== by 0x13D72938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25479== by 0x13D28922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25479== by 0x13CCD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25479== by 0xEC54418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25479== by 0xEBEDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25479== by 0xD8E4D38: PetscInitialize (pinit.c:924) ==25479== by 0xD753E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25479== by 0xD753EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25479== by 0x1361D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25479== by 0x12EF6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25479== by 0x131C2A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25479== by 0x131ACA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25479== by 0x132161: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25479== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==25479== ==25479== Open file descriptor 145: ==25479== ==25479== ==25479== Open file descriptor 142: ==25479== ==25479== ==25479== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==25479== ==25479== ==25479== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25479== ==25479== ==25479== ==25479== HEAP SUMMARY: ==25479== in use at exit: 638,001 bytes in 8,475 blocks ==25479== total heap usage: 4,179,810 allocs, 4,171,335 frees, 1,771,575,563 bytes allocated ==25479== ==25479== LEAK SUMMARY: ==25479== definitely lost: 0 bytes in 0 blocks ==25479== indirectly lost: 0 bytes in 0 blocks ==25479== possibly lost: 0 bytes in 0 blocks ==25479== still reachable: 72 bytes in 4 blocks ==25479== suppressed: 637,929 bytes in 8,471 blocks ==25479== Reachable blocks (those to which a pointer was found) are not shown. ==25479== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25479== ==25479== For lists of detected and suppressed errors, rerun with: -s ==25479== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)