==26011== Memcheck, a memory error detector ==26011== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26011== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26011== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMutableVertexMeshOperationsWithPopulationSrn -malloc_debug -malloc_dump -memory_info ==26011== Parent PID: 24013 ==26011== ==26011== ==26011== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26011== Open file descriptor 12: ==26011== at 0x10D2C0ED: pipe (pipe.c:29) ==26011== by 0x1972D07D: ??? ==26011== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26011== by 0x10979418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26011== by 0x10912D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26011== by 0xF609D38: PetscInitialize (pinit.c:924) ==26011== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26011== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26011== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26011== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26011== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26011== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26011== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26011== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==26011== ==26011== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26011== at 0x10D30A8C: __open_nocancel (open64_nocancel.c:39) ==26011== by 0x10CB4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26011== by 0xF1B3822: ??? ==26011== by 0xF1B396F: ??? ==26011== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26011== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26011== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26011== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26011== by 0x10979418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26011== by 0x10912D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26011== by 0xF609D38: PetscInitialize (pinit.c:924) ==26011== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26011== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26011== by 0x12FA43: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26011== by 0x12AAD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26011== by 0x12D2E4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26011== by 0x12D1E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26011== by 0x12D7F3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26011== by 0x1292D5: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==26011== ==26011== Open file descriptor 145: ==26011== ==26011== ==26011== Open file descriptor 142: ==26011== ==26011== ==26011== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshOperationsWithPopulationSrn_valgrind.txt ==26011== ==26011== ==26011== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26011== ==26011== ==26011== ==26011== HEAP SUMMARY: ==26011== in use at exit: 618,423 bytes in 8,240 blocks ==26011== total heap usage: 60,785 allocs, 52,545 frees, 1,339,647,337 bytes allocated ==26011== ==26011== LEAK SUMMARY: ==26011== definitely lost: 0 bytes in 0 blocks ==26011== indirectly lost: 0 bytes in 0 blocks ==26011== possibly lost: 0 bytes in 0 blocks ==26011== still reachable: 56 bytes in 3 blocks ==26011== suppressed: 618,367 bytes in 8,237 blocks ==26011== Reachable blocks (those to which a pointer was found) are not shown. ==26011== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26011== ==26011== For lists of detected and suppressed errors, rerun with: -s ==26011== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)