==24320== Memcheck, a memory error detector ==24320== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24320== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24320== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==24320== Parent PID: 24058 ==24320== ==24320== ==24320== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24320== Open file descriptor 12: ==24320== at 0x627C0ED: pipe (pipe.c:29) ==24320== by 0xAF2E07D: ??? ==24320== by 0x8B304CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24320== by 0x5ECB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24320== by 0x5E64D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24320== by 0x49C3D38: PetscInitialize (pinit.c:924) ==24320== by 0x5CF9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24320== by 0x5CF9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24320== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24320== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24320== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24320== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24320== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24320== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==24320== ==24320== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24320== at 0x6280A8C: __open_nocancel (open64_nocancel.c:39) ==24320== by 0x6204BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24320== by 0x5D37822: ??? ==24320== by 0x5D3796F: ??? ==24320== by 0x8BD56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24320== by 0x8BD5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24320== by 0x8B8B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24320== by 0x8B302DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24320== by 0x5ECB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24320== by 0x5E64D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24320== by 0x49C3D38: PetscInitialize (pinit.c:924) ==24320== by 0x5CF9E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24320== by 0x5CF9EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24320== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24320== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24320== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24320== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24320== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24320== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==24320== ==24320== Open file descriptor 145: ==24320== ==24320== ==24320== Open file descriptor 142: ==24320== ==24320== ==24320== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==24320== ==24320== ==24320== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24320== ==24320== ==24320== ==24320== HEAP SUMMARY: ==24320== in use at exit: 617,927 bytes in 8,239 blocks ==24320== total heap usage: 61,713 allocs, 53,474 frees, 1,341,512,620 bytes allocated ==24320== ==24320== LEAK SUMMARY: ==24320== definitely lost: 0 bytes in 0 blocks ==24320== indirectly lost: 0 bytes in 0 blocks ==24320== possibly lost: 0 bytes in 0 blocks ==24320== still reachable: 24 bytes in 2 blocks ==24320== suppressed: 617,903 bytes in 8,237 blocks ==24320== Reachable blocks (those to which a pointer was found) are not shown. ==24320== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24320== ==24320== For lists of detected and suppressed errors, rerun with: -s ==24320== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)