==24093== Memcheck, a memory error detector ==24093== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24093== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24093== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==24093== Parent PID: 24089 ==24093== ==24093== ==24093== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24093== Open file descriptor 12: ==24093== at 0x4CC30ED: pipe (pipe.c:29) ==24093== by 0xAEB907D: ??? ==24093== by 0x644B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24093== by 0x4EC0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24093== by 0x4E59D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24093== by 0x5047D38: PetscInitialize (pinit.c:924) ==24093== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24093== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24093== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==24093== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==24093== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==24093== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==24093== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==24093== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==24093== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24093== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24093== by 0x110C15: main (TestCitations.cpp:18) ==24093== ==24093== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24093== at 0x4CC7A8C: __open_nocancel (open64_nocancel.c:39) ==24093== by 0x4C4BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24093== by 0x4946822: ??? ==24093== by 0x494696F: ??? ==24093== by 0x64F26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24093== by 0x64F2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24093== by 0x64A8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24093== by 0x644B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24093== by 0x4EC0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24093== by 0x4E59D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24093== by 0x5047D38: PetscInitialize (pinit.c:924) ==24093== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24093== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24093== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==24093== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==24093== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==24093== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==24093== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==24093== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==24093== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24093== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24093== by 0x110C15: main (TestCitations.cpp:18) ==24093== ==24093== Open file descriptor 145: ==24093== ==24093== ==24093== Open file descriptor 142: ==24093== ==24093== ==24093== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==24093== ==24093== ==24093== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24093== ==24093== ==24093== ==24093== HEAP SUMMARY: ==24093== in use at exit: 617,911 bytes in 8,239 blocks ==24093== total heap usage: 45,216 allocs, 36,977 frees, 1,338,666,830 bytes allocated ==24093== ==24093== LEAK SUMMARY: ==24093== definitely lost: 0 bytes in 0 blocks ==24093== indirectly lost: 0 bytes in 0 blocks ==24093== possibly lost: 0 bytes in 0 blocks ==24093== still reachable: 24 bytes in 2 blocks ==24093== suppressed: 617,887 bytes in 8,237 blocks ==24093== Reachable blocks (those to which a pointer was found) are not shown. ==24093== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24093== ==24093== For lists of detected and suppressed errors, rerun with: -s ==24093== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)