==26067== Memcheck, a memory error detector ==26067== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26067== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26067== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==26067== Parent PID: 24089 ==26067== ==26067== ==26067== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26067== Open file descriptor 12: ==26067== at 0xF95C0ED: pipe (pipe.c:29) ==26067== by 0x1972D07D: ??? ==26067== by 0x12B784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26067== by 0x10256418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26067== by 0x101EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26067== by 0x103DDD38: PetscInitialize (pinit.c:924) ==26067== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26067== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26067== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26067== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26067== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26067== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26067== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26067== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==26067== ==26067== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26067== at 0xF960A8C: __open_nocancel (open64_nocancel.c:39) ==26067== by 0xF8E4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26067== by 0xF1B3822: ??? ==26067== by 0xF1B396F: ??? ==26067== by 0x12C1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26067== by 0x12C1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26067== by 0x12BD3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26067== by 0x12B782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26067== by 0x10256418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26067== by 0x101EFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26067== by 0x103DDD38: PetscInitialize (pinit.c:924) ==26067== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26067== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26067== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26067== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26067== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26067== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26067== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26067== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==26067== ==26067== Open file descriptor 145: ==26067== ==26067== ==26067== Open file descriptor 142: ==26067== ==26067== ==26067== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==26067== ==26067== ==26067== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26067== ==26067== ==26067== ==26067== HEAP SUMMARY: ==26067== in use at exit: 618,423 bytes in 8,240 blocks ==26067== total heap usage: 53,051 allocs, 44,811 frees, 1,339,238,834 bytes allocated ==26067== ==26067== LEAK SUMMARY: ==26067== definitely lost: 0 bytes in 0 blocks ==26067== indirectly lost: 0 bytes in 0 blocks ==26067== possibly lost: 0 bytes in 0 blocks ==26067== still reachable: 56 bytes in 3 blocks ==26067== suppressed: 618,367 bytes in 8,237 blocks ==26067== Reachable blocks (those to which a pointer was found) are not shown. ==26067== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26067== ==26067== For lists of detected and suppressed errors, rerun with: -s ==26067== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)