==25321== Memcheck, a memory error detector ==25321== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25321== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25321== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedCellProperties -malloc_debug -malloc_dump -memory_info ==25321== Parent PID: 23980 ==25321== ==25321== ==25321== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25321== Open file descriptor 12: ==25321== at 0xEDC30ED: pipe (pipe.c:29) ==25321== by 0x1972D07D: ??? ==25321== by 0x13C7C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25321== by 0xEA12418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25321== by 0xE9ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25321== by 0xD6A2D38: PetscInitialize (pinit.c:924) ==25321== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25321== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25321== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25321== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25321== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25321== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25321== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25321== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==25321== ==25321== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25321== at 0xEDC7A8C: __open_nocancel (open64_nocancel.c:39) ==25321== by 0xED4BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25321== by 0xD54D822: ??? ==25321== by 0xD54D96F: ??? ==25321== by 0x13D216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25321== by 0x13D21938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25321== by 0x13CD7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25321== by 0x13C7C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25321== by 0xEA12418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25321== by 0xE9ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25321== by 0xD6A2D38: PetscInitialize (pinit.c:924) ==25321== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25321== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25321== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25321== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25321== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25321== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25321== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25321== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==25321== ==25321== Open file descriptor 145: ==25321== ==25321== ==25321== Open file descriptor 142: ==25321== ==25321== ==25321== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedCellProperties_valgrind.txt ==25321== ==25321== ==25321== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25321== ==25321== ==25321== ==25321== HEAP SUMMARY: ==25321== in use at exit: 618,423 bytes in 8,240 blocks ==25321== total heap usage: 53,394 allocs, 45,154 frees, 1,339,331,114 bytes allocated ==25321== ==25321== LEAK SUMMARY: ==25321== definitely lost: 0 bytes in 0 blocks ==25321== indirectly lost: 0 bytes in 0 blocks ==25321== possibly lost: 0 bytes in 0 blocks ==25321== still reachable: 56 bytes in 3 blocks ==25321== suppressed: 618,367 bytes in 8,237 blocks ==25321== Reachable blocks (those to which a pointer was found) are not shown. ==25321== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25321== ==25321== For lists of detected and suppressed errors, rerun with: -s ==25321== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)