==40999== Memcheck, a memory error detector ==40999== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40999== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40999== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMatrixVentilationProblem -malloc_debug -malloc_dump -memory_info ==40999== Parent PID: 23980 ==40999== ==40999== ==40999== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40999== Open file descriptor 12: ==40999== at 0x81F30ED: pipe (pipe.c:29) ==40999== by 0x107C307D: ??? ==40999== by 0xC0794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40999== by 0x83EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40999== by 0x8387D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40999== by 0x4A6ED38: PetscInitialize (pinit.c:924) ==40999== by 0x7A0AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40999== by 0x7A0AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40999== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40999== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40999== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40999== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40999== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40999== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==40999== ==40999== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40999== at 0x81F7A8C: __open_nocancel (open64_nocancel.c:39) ==40999== by 0x817BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40999== by 0x7A48822: ??? ==40999== by 0x7A4896F: ??? ==40999== by 0xC11E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40999== by 0xC11E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40999== by 0xC0D4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40999== by 0xC0792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40999== by 0x83EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40999== by 0x8387D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40999== by 0x4A6ED38: PetscInitialize (pinit.c:924) ==40999== by 0x7A0AE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40999== by 0x7A0AEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40999== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40999== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40999== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40999== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40999== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40999== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==40999== ==40999== Open file descriptor 145: ==40999== ==40999== ==40999== Open file descriptor 142: ==40999== ==40999== ==40999== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMatrixVentilationProblem_valgrind.txt ==40999== ==40999== ==40999== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40999== ==40999== ==40999== ==40999== HEAP SUMMARY: ==40999== in use at exit: 618,391 bytes in 8,239 blocks ==40999== total heap usage: 137,450 allocs, 129,211 frees, 1,515,538,747 bytes allocated ==40999== ==40999== LEAK SUMMARY: ==40999== definitely lost: 0 bytes in 0 blocks ==40999== indirectly lost: 0 bytes in 0 blocks ==40999== possibly lost: 0 bytes in 0 blocks ==40999== still reachable: 24 bytes in 2 blocks ==40999== suppressed: 618,367 bytes in 8,237 blocks ==40999== Reachable blocks (those to which a pointer was found) are not shown. ==40999== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40999== ==40999== For lists of detected and suppressed errors, rerun with: -s ==40999== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)