==25716== Memcheck, a memory error detector ==25716== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25716== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25716== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationTime -malloc_debug -malloc_dump -memory_info ==25716== Parent PID: 23980 ==25716== ==25716== ==25716== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25716== Open file descriptor 12: ==25716== at 0xD90E0ED: pipe (pipe.c:29) ==25716== by 0x1972D07D: ??? ==25716== by 0x12B1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25716== by 0xFE6A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25716== by 0xFE03D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25716== by 0xFFB1D38: PetscInitialize (pinit.c:924) ==25716== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25716== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25716== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25716== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25716== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25716== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25716== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25716== by 0x154225: main (TestSimulationTime.cpp:19) ==25716== ==25716== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25716== at 0xD912A8C: __open_nocancel (open64_nocancel.c:39) ==25716== by 0xD896BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25716== by 0xD54D822: ??? ==25716== by 0xD54D96F: ??? ==25716== by 0x12BC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25716== by 0x12BC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25716== by 0x12B79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25716== by 0x12B1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25716== by 0xFE6A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25716== by 0xFE03D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25716== by 0xFFB1D38: PetscInitialize (pinit.c:924) ==25716== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25716== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25716== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25716== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25716== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25716== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25716== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25716== by 0x154225: main (TestSimulationTime.cpp:19) ==25716== ==25716== Open file descriptor 145: ==25716== ==25716== ==25716== Open file descriptor 142: ==25716== ==25716== ==25716== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationTime_valgrind.txt ==25716== ==25716== ==25716== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25716== ==25716== ==25716== ==25716== HEAP SUMMARY: ==25716== in use at exit: 618,391 bytes in 8,239 blocks ==25716== total heap usage: 53,178 allocs, 44,939 frees, 1,339,257,540 bytes allocated ==25716== ==25716== LEAK SUMMARY: ==25716== definitely lost: 0 bytes in 0 blocks ==25716== indirectly lost: 0 bytes in 0 blocks ==25716== possibly lost: 0 bytes in 0 blocks ==25716== still reachable: 24 bytes in 2 blocks ==25716== suppressed: 618,367 bytes in 8,237 blocks ==25716== Reachable blocks (those to which a pointer was found) are not shown. ==25716== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25716== ==25716== For lists of detected and suppressed errors, rerun with: -s ==25716== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)