==39494== Memcheck, a memory error detector ==39494== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39494== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39494== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestStepSizeException -malloc_debug -malloc_dump -memory_info ==39494== Parent PID: 23980 ==39494== ==39494== ==39494== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39494== Open file descriptor 12: ==39494== at 0x4CC50ED: pipe (pipe.c:29) ==39494== by 0xAEBB07D: ??? ==39494== by 0x644D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39494== by 0x4EC0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39494== by 0x4E59D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39494== by 0x5047D38: PetscInitialize (pinit.c:924) ==39494== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39494== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39494== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39494== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39494== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39494== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39494== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39494== by 0x10D735: main (TestStepSizeException.cpp:19) ==39494== ==39494== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39494== at 0x4CC9A8C: __open_nocancel (open64_nocancel.c:39) ==39494== by 0x4C4DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39494== by 0x4946822: ??? ==39494== by 0x494696F: ??? ==39494== by 0x64F26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39494== by 0x64F2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39494== by 0x64A8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39494== by 0x644D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39494== by 0x4EC0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39494== by 0x4E59D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39494== by 0x5047D38: PetscInitialize (pinit.c:924) ==39494== by 0x4908E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39494== by 0x4908EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39494== by 0x113D54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39494== by 0x10F30D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39494== by 0x111C9E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39494== by 0x111B3E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39494== by 0x1121D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39494== by 0x10D735: main (TestStepSizeException.cpp:19) ==39494== ==39494== Open file descriptor 145: ==39494== ==39494== ==39494== Open file descriptor 142: ==39494== ==39494== ==39494== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestStepSizeException_valgrind.txt ==39494== ==39494== ==39494== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39494== ==39494== ==39494== ==39494== HEAP SUMMARY: ==39494== in use at exit: 617,911 bytes in 8,239 blocks ==39494== total heap usage: 44,917 allocs, 36,678 frees, 1,338,497,772 bytes allocated ==39494== ==39494== LEAK SUMMARY: ==39494== definitely lost: 0 bytes in 0 blocks ==39494== indirectly lost: 0 bytes in 0 blocks ==39494== possibly lost: 0 bytes in 0 blocks ==39494== still reachable: 24 bytes in 2 blocks ==39494== suppressed: 617,887 bytes in 8,237 blocks ==39494== Reachable blocks (those to which a pointer was found) are not shown. ==39494== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39494== ==39494== For lists of detected and suppressed errors, rerun with: -s ==39494== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)