==41106== Memcheck, a memory error detector ==41106== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41106== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41106== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41106== Parent PID: 23999 ==41106== ==41106== ==41106== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41106== Open file descriptor 12: ==41106== at 0xC1050ED: pipe (pipe.c:29) ==41106== by 0x1434607D: ??? ==41106== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41106== by 0xBA0D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41106== by 0xB9A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41106== by 0x8258D38: PetscInitialize (pinit.c:924) ==41106== by 0xB8D5E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41106== by 0xB8D5EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41106== by 0x1408C6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41106== by 0x13A07D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41106== by 0x13D758: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41106== by 0x13D5F8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41106== by 0x13DC8F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41106== by 0x138305: main (TestBidomainProblem.cpp:19) ==41106== ==41106== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41106== at 0xC109A8C: __open_nocancel (open64_nocancel.c:39) ==41106== by 0xC08DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41106== by 0x8103822: ??? ==41106== by 0x810396F: ??? ==41106== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41106== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41106== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41106== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41106== by 0xBA0D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41106== by 0xB9A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41106== by 0x8258D38: PetscInitialize (pinit.c:924) ==41106== by 0xB8D5E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41106== by 0xB8D5EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41106== by 0x1408C6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41106== by 0x13A07D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41106== by 0x13D758: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41106== by 0x13D5F8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41106== by 0x13DC8F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41106== by 0x138305: main (TestBidomainProblem.cpp:19) ==41106== ==41106== Open file descriptor 145: ==41106== ==41106== ==41106== Open file descriptor 142: ==41106== ==41106== ==41106== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41106== ==41106== ==41106== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41106== ==41106== ==41106== ==41106== HEAP SUMMARY: ==41106== in use at exit: 638,522 bytes in 8,487 blocks ==41106== total heap usage: 585,468 allocs, 576,981 frees, 1,550,487,004 bytes allocated ==41106== ==41106== LEAK SUMMARY: ==41106== definitely lost: 0 bytes in 0 blocks ==41106== indirectly lost: 0 bytes in 0 blocks ==41106== possibly lost: 0 bytes in 0 blocks ==41106== still reachable: 24 bytes in 2 blocks ==41106== suppressed: 638,498 bytes in 8,485 blocks ==41106== Reachable blocks (those to which a pointer was found) are not shown. ==41106== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41106== ==41106== For lists of detected and suppressed errors, rerun with: -s ==41106== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)