==25328== Memcheck, a memory error detector ==25328== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25328== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25328== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==25328== Parent PID: 23999 ==25328== ==25328== ==25328== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25328== Open file descriptor 12: ==25328== at 0xED810ED: pipe (pipe.c:29) ==25328== by 0x1972D07D: ??? ==25328== by 0x13C7C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25328== by 0xE9D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25328== by 0xE969D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25328== by 0xD63DD38: PetscInitialize (pinit.c:924) ==25328== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25328== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25328== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25328== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25328== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25328== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25328== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25328== by 0x1222F5: main (TestCell.cpp:19) ==25328== ==25328== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25328== at 0xED85A8C: __open_nocancel (open64_nocancel.c:39) ==25328== by 0xED09BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25328== by 0xE8CD822: ??? ==25328== by 0xE8CD96F: ??? ==25328== by 0x13D216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25328== by 0x13D21938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25328== by 0x13CD7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25328== by 0x13C7C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25328== by 0xE9D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25328== by 0xE969D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25328== by 0xD63DD38: PetscInitialize (pinit.c:924) ==25328== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25328== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25328== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25328== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25328== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25328== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25328== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25328== by 0x1222F5: main (TestCell.cpp:19) ==25328== ==25328== Open file descriptor 145: ==25328== ==25328== ==25328== Open file descriptor 142: ==25328== ==25328== ==25328== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==25328== ==25328== ==25328== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25328== ==25328== ==25328== ==25328== HEAP SUMMARY: ==25328== in use at exit: 638,113 bytes in 8,475 blocks ==25328== total heap usage: 5,184,023 allocs, 5,175,548 frees, 1,820,691,338 bytes allocated ==25328== ==25328== LEAK SUMMARY: ==25328== definitely lost: 0 bytes in 0 blocks ==25328== indirectly lost: 0 bytes in 0 blocks ==25328== possibly lost: 0 bytes in 0 blocks ==25328== still reachable: 184 bytes in 4 blocks ==25328== suppressed: 637,929 bytes in 8,471 blocks ==25328== Reachable blocks (those to which a pointer was found) are not shown. ==25328== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25328== ==25328== For lists of detected and suppressed errors, rerun with: -s ==25328== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)