==39650== Memcheck, a memory error detector ==39650== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39650== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39650== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==39650== Parent PID: 23999 ==39650== ==39650== ==39650== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39650== Open file descriptor 12: ==39650== at 0x10E550ED: pipe (pipe.c:29) ==39650== by 0x1972D07D: ??? ==39650== by 0x14CE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39650== by 0x109BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39650== by 0x10954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39650== by 0xF64BD38: PetscInitialize (pinit.c:924) ==39650== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39650== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39650== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39650== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39650== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39650== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39650== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39650== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==39650== ==39650== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39650== at 0x10E59A8C: __open_nocancel (open64_nocancel.c:39) ==39650== by 0x10DDDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39650== by 0xF1B3822: ??? ==39650== by 0xF1B396F: ??? ==39650== by 0x14D866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39650== by 0x14D86938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39650== by 0x14D3C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39650== by 0x14CE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39650== by 0x109BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39650== by 0x10954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39650== by 0xF64BD38: PetscInitialize (pinit.c:924) ==39650== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39650== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39650== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39650== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39650== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39650== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39650== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39650== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==39650== ==39650== Open file descriptor 145: ==39650== ==39650== ==39650== Open file descriptor 142: ==39650== ==39650== ==39650== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==39650== ==39650== ==39650== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39650== ==39650== ==39650== ==39650== HEAP SUMMARY: ==39650== in use at exit: 637,985 bytes in 8,474 blocks ==39650== total heap usage: 8,979,233 allocs, 8,970,759 frees, 2,191,577,609 bytes allocated ==39650== ==39650== LEAK SUMMARY: ==39650== definitely lost: 0 bytes in 0 blocks ==39650== indirectly lost: 0 bytes in 0 blocks ==39650== possibly lost: 0 bytes in 0 blocks ==39650== still reachable: 56 bytes in 3 blocks ==39650== suppressed: 637,929 bytes in 8,471 blocks ==39650== Reachable blocks (those to which a pointer was found) are not shown. ==39650== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39650== ==39650== For lists of detected and suppressed errors, rerun with: -s ==39650== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)