==25679== Memcheck, a memory error detector ==25679== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25679== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25679== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsMesh -malloc_debug -malloc_dump -memory_info ==25679== Parent PID: 23999 ==25679== ==25679== ==25679== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25679== Open file descriptor 12: ==25679== at 0xF5720ED: pipe (pipe.c:29) ==25679== by 0x1972D07D: ??? ==25679== by 0x12B2B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25679== by 0xFE6A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25679== by 0xFE03D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25679== by 0xFFB1D38: PetscInitialize (pinit.c:924) ==25679== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25679== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25679== by 0x1387F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25679== by 0x13327D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25679== by 0x1362B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25679== by 0x136152: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25679== by 0x1367E9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25679== by 0x1316A5: main (TestPottsMesh.cpp:19) ==25679== ==25679== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25679== at 0xF576A8C: __open_nocancel (open64_nocancel.c:39) ==25679== by 0xF4FABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25679== by 0xF1B3822: ??? ==25679== by 0xF1B396F: ??? ==25679== by 0x12BD06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25679== by 0x12BD0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25679== by 0x12B86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25679== by 0x12B2B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25679== by 0xFE6A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25679== by 0xFE03D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25679== by 0xFFB1D38: PetscInitialize (pinit.c:924) ==25679== by 0xF175E75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25679== by 0xF175EC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25679== by 0x1387F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25679== by 0x13327D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25679== by 0x1362B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25679== by 0x136152: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25679== by 0x1367E9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25679== by 0x1316A5: main (TestPottsMesh.cpp:19) ==25679== ==25679== Open file descriptor 145: ==25679== ==25679== ==25679== Open file descriptor 142: ==25679== ==25679== ==25679== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsMesh_valgrind.txt ==25679== ==25679== ==25679== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25679== ==25679== ==25679== ==25679== HEAP SUMMARY: ==25679== in use at exit: 638,026 bytes in 8,477 blocks ==25679== total heap usage: 79,817 allocs, 71,340 frees, 1,341,875,761 bytes allocated ==25679== ==25679== LEAK SUMMARY: ==25679== definitely lost: 0 bytes in 0 blocks ==25679== indirectly lost: 0 bytes in 0 blocks ==25679== possibly lost: 0 bytes in 0 blocks ==25679== still reachable: 24 bytes in 2 blocks ==25679== suppressed: 638,002 bytes in 8,475 blocks ==25679== Reachable blocks (those to which a pointer was found) are not shown. ==25679== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25679== ==25679== For lists of detected and suppressed errors, rerun with: -s ==25679== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)