==25361== Memcheck, a memory error detector ==25361== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25361== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25361== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellMutationStates -malloc_debug -malloc_dump -memory_info ==25361== Parent PID: 23997 ==25361== ==25361== ==25361== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25361== Open file descriptor 12: ==25361== at 0xEDC30ED: pipe (pipe.c:29) ==25361== by 0x1972D07D: ??? ==25361== by 0x13C7C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25361== by 0xEA12418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25361== by 0xE9ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25361== by 0xD6A2D38: PetscInitialize (pinit.c:924) ==25361== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25361== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25361== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25361== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25361== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25361== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25361== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25361== by 0x125225: main (TestCellMutationStates.cpp:19) ==25361== ==25361== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25361== at 0xEDC7A8C: __open_nocancel (open64_nocancel.c:39) ==25361== by 0xED4BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25361== by 0xD54D822: ??? ==25361== by 0xD54D96F: ??? ==25361== by 0x13D216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25361== by 0x13D21938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25361== by 0x13CD7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25361== by 0x13C7C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25361== by 0xEA12418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25361== by 0xE9ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25361== by 0xD6A2D38: PetscInitialize (pinit.c:924) ==25361== by 0xD50FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25361== by 0xD50FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25361== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25361== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25361== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25361== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25361== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25361== by 0x125225: main (TestCellMutationStates.cpp:19) ==25361== ==25361== Open file descriptor 145: ==25361== ==25361== ==25361== Open file descriptor 142: ==25361== ==25361== ==25361== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellMutationStates_valgrind.txt ==25361== ==25361== ==25361== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25361== ==25361== ==25361== ==25361== HEAP SUMMARY: ==25361== in use at exit: 618,423 bytes in 8,240 blocks ==25361== total heap usage: 53,140 allocs, 44,900 frees, 1,339,260,391 bytes allocated ==25361== ==25361== LEAK SUMMARY: ==25361== definitely lost: 0 bytes in 0 blocks ==25361== indirectly lost: 0 bytes in 0 blocks ==25361== possibly lost: 0 bytes in 0 blocks ==25361== still reachable: 56 bytes in 3 blocks ==25361== suppressed: 618,367 bytes in 8,237 blocks ==25361== Reachable blocks (those to which a pointer was found) are not shown. ==25361== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25361== ==25361== For lists of detected and suppressed errors, rerun with: -s ==25361== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)