==24678== Memcheck, a memory error detector ==24678== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24678== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24678== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestToroidalHoneycombMeshGenerator -malloc_debug -malloc_dump -memory_info ==24678== Parent PID: 24133 ==24678== ==24678== ==24678== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24678== Open file descriptor 12: ==24678== at 0x81230ED: pipe (pipe.c:29) ==24678== by 0x100E407D: ??? ==24678== by 0xBA684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24678== by 0x7D72418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24678== by 0x7D0BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24678== by 0x6A02D38: PetscInitialize (pinit.c:924) ==24678== by 0x656CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24678== by 0x656CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24678== by 0x11717D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24678== by 0x1125CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24678== by 0x114F48: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24678== by 0x114DE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24678== by 0x11547F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24678== by 0x1109F5: main (TestToroidalHoneycombMeshGenerator.cpp:19) ==24678== ==24678== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24678== at 0x8127A8C: __open_nocancel (open64_nocancel.c:39) ==24678== by 0x80ABBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24678== by 0x65AA822: ??? ==24678== by 0x65AA96F: ??? ==24678== by 0xBB0D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24678== by 0xBB0D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24678== by 0xBAC3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24678== by 0xBA682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24678== by 0x7D72418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24678== by 0x7D0BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24678== by 0x6A02D38: PetscInitialize (pinit.c:924) ==24678== by 0x656CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24678== by 0x656CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24678== by 0x11717D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24678== by 0x1125CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24678== by 0x114F48: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24678== by 0x114DE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24678== by 0x11547F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24678== by 0x1109F5: main (TestToroidalHoneycombMeshGenerator.cpp:19) ==24678== ==24678== Open file descriptor 145: ==24678== ==24678== ==24678== Open file descriptor 142: ==24678== ==24678== ==24678== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestToroidalHoneycombMeshGenerator_valgrind.txt ==24678== ==24678== ==24678== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24678== ==24678== ==24678== ==24678== HEAP SUMMARY: ==24678== in use at exit: 618,295 bytes in 8,239 blocks ==24678== total heap usage: 105,623 allocs, 97,384 frees, 1,343,243,264 bytes allocated ==24678== ==24678== LEAK SUMMARY: ==24678== definitely lost: 0 bytes in 0 blocks ==24678== indirectly lost: 0 bytes in 0 blocks ==24678== possibly lost: 0 bytes in 0 blocks ==24678== still reachable: 24 bytes in 2 blocks ==24678== suppressed: 618,271 bytes in 8,237 blocks ==24678== Reachable blocks (those to which a pointer was found) are not shown. ==24678== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24678== ==24678== For lists of detected and suppressed errors, rerun with: -s ==24678== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)