==42196== Memcheck, a memory error detector ==42196== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42196== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42196== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==42196== Parent PID: 24607 ==42196== ==42196== ==42196== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42196== Open file descriptor 12: ==42196== at 0x9C790ED: pipe (pipe.c:29) ==42196== by 0x1434807D: ??? ==42196== by 0xEE3B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42196== by 0x98C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42196== by 0x985FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42196== by 0x81F1D38: PetscInitialize (pinit.c:924) ==42196== by 0x976BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42196== by 0x976BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42196== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42196== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42196== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42196== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42196== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42196== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==42196== ==42196== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42196== at 0x9C7DA8C: __open_nocancel (open64_nocancel.c:39) ==42196== by 0x9C01BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42196== by 0x97A9822: ??? ==42196== by 0x97A996F: ??? ==42196== by 0xEEE06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42196== by 0xEEE0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42196== by 0xEE96922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42196== by 0xEE3B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42196== by 0x98C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42196== by 0x985FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42196== by 0x81F1D38: PetscInitialize (pinit.c:924) ==42196== by 0x976BE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42196== by 0x976BEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42196== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42196== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42196== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42196== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42196== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42196== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==42196== ==42196== Open file descriptor 145: ==42196== ==42196== ==42196== Open file descriptor 142: ==42196== ==42196== ==42196== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==42196== ==42196== ==42196== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42196== ==42196== ==42196== ==42196== HEAP SUMMARY: ==42196== in use at exit: 618,334 bytes in 8,235 blocks ==42196== total heap usage: 74,030 allocs, 65,795 frees, 1,342,977,038 bytes allocated ==42196== ==42196== LEAK SUMMARY: ==42196== definitely lost: 0 bytes in 0 blocks ==42196== indirectly lost: 0 bytes in 0 blocks ==42196== possibly lost: 0 bytes in 0 blocks ==42196== still reachable: 24 bytes in 2 blocks ==42196== suppressed: 618,310 bytes in 8,233 blocks ==42196== Reachable blocks (those to which a pointer was found) are not shown. ==42196== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42196== ==42196== For lists of detected and suppressed errors, rerun with: -s ==42196== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)